Cynara cardunculus var. scolymus (artichoke): 112500991
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Entry
112500991 CDS
T05604
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112500991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112500991
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
112500991
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF3141
Motif
Other DBs
NCBI-GeneID:
112500991
NCBI-ProteinID:
XP_024960383
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All DBs
Position
LG 17:complement(36060207..36070436)
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AA seq
346 aa
AA seq
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MNLKSAQASSYRDRTQEFSSIGERLRKSLSSSNAVAGINSSGGAGGSTKAEGSRSTVAFQ
SEFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTALIKQDITALNAAVV
DLQLVCNSQNESENVSSDTTTHSTTVVDNLKTRLMSTTKEFKEVLTMRTENLKVHENRRQ
LFSATTSKETANPFVRQRPLANKSTATASNSPPPWANDSSSSSPLFPRKLADTESQPLLQ
QQNQQQQQMVPLQDSYMQSRAEALHNVESTIHELGNIFTQLATMVSQQGELAIRIDENME
DTLANVEGAQGQLMRYLNSISSNRWLMIKIFFVLIAFLMIFLFFVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaaatcggcgcaagcgtcgtcatatagagatcgtacacaggagttttcgagc
ataggggagagactaagaaaatcgttatcatcgtcaaatgcggtagcggggattaatagt
agtggaggtgctggtggttccaccaaggctgagggatcgcgatcaacggtcgcattccag
tcggagtttaacaagagggcttccaaaattgggtatgggattcaccaaacgtcgcagaag
ctggcgaagcttgcaaaattggcaaagaggacatccgtttttgatgatccaactatggag
atccaagagctgactgctctcattaagcaggacattactgcccttaatgcagctgtggtg
gatttgcagcttgtttgcaattcccaaaatgaaagtgaaaatgtttcaagtgatacaacc
acccattcaaccacagtggttgacaatctgaagacccgtttgatgagcaccacaaaggag
ttcaaggaagttcttaccatgcggacagagaacctgaaggttcatgaaaatagaaggcag
ttattttctgcaactacttcaaaagagaccgctaatccatttgtccgtcagcgtccctta
gctaataaatcaactgccactgcatcaaactctcctcctccgtgggctaatgactcttca
agttcatctccgttgttcccaaggaagcttgcagatactgaatctcagccgctgctacaa
caacaaaatcagcagcaacaacagatggttccattacaagacagttacatgcagagcaga
gctgaggctcttcacaatgttgagtcaactattcatgagcttggcaacattttcactcaa
ttggcgaccatggtttctcagcaaggggagctcgcaattaggattgacgaaaacatggaa
gatactctggcaaacgtcgaaggggcacaaggacaacttatgaggtacctcaacagtata
tcgtccaatcggtggctaatgatcaagatattcttcgtattgattgcattcctcatgatt
ttcctcttttttgttgcttaa
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