Cynara cardunculus var. scolymus (artichoke): 112501040
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Entry
112501040 CDS
T05604
Name
(RefSeq) tRNA dimethylallyltransferase 9
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00908
Zeatin biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
112501040
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccav01006
]
112501040
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112501040
Enzymes [BR:
ccav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
112501040
Prenyltransferases [BR:
ccav01006
]
Compound prenylation
tRNA dimethylallyltransferase
112501040
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
112501040
Prokaryotic type
112501040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
AAA_16
AAA_33
nSTAND3
AAA_22
Hpr_kinase_C
RNA_helicase
AAA_18
ABC_tran
ResIII
Cytidylate_kin
Zeta_toxin
PPV_E1_C
AAA_PrkA
Adeno_IVa2
TsaE
ATPase_2
SLFN-g3_helicase
AAA_5
zf-MIZ
Rad17
AAA_25
AAA
NPHP3_N
AAA_14
T2SSE
Motif
Other DBs
NCBI-GeneID:
112501040
NCBI-ProteinID:
XP_024960445
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All DBs
Position
LG 17:complement(2378618..2386797)
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AA seq
466 aa
AA seq
DB search
MNIVIGRFSMSYLRLSYAPPELFLFPPSTLSFLVHRRHCCRRRLFSSFRCSASANSKKEK
VIVISGPTGAGKSRLALELCKKLNGEIISADSVQVYQGLDVGSAKPSMSERQEVPHHLID
ILHPADDYSAGNFYEDGRQATKDILNRGSAPIVTGGTGLYLRWFIYGKPDVPKASPEISL
EVESELANFERNYDWDAAVEWVTKAGDPSAQSLPANDWYRLRRKLEIVKSTGLPPSAFPV
PYETFKEQIDSHTKDLDIDISTEGILAEKQKDLDYDFICFFLSTSRLDLYRSIDFRCEDM
ISGNDGILSEARWLLDMGLQPNSNSATRAIGYRQAMEYLLKCEEQGGRSSERDFYAFLSE
FQKASRNFAKRQLTWFRNEPIYHWVDASRPLEEVLEFIYNAYHDQTGKLAVPRSLSMKKD
MSDRREIAQLKIYRPQRGLFTSHEACSDVLNWVSNNQRQKTELIAK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcatcggaaggtttagcatgagttacctccggctatcgtatgcaccgccg
gagttatttctcttccctccttctactctctccttcctcgtacaccgtcgccactgctgc
cggagacggctgtttagtagcttccgctgctctgcctccgcaaactcgaagaaggagaaa
gtcattgttatatctgggccaaccggcgccggaaaaagtaggctcgcattagagctctgt
aaaaagcttaatggcgaaatcattagtgcagactctgtccaggtttatcaaggtcttgat
gttggatctgcaaagccttctatgagtgaaagacaggaagtgccacatcatttaattgac
atattgcaccctgctgatgattattctgctgggaacttctatgaagatgggaggcaagct
acaaaagatattcttaatagaggcagtgctccaatagttactggagggactggtttatac
ttaagatggttcatatatgggaaaccagatgttccaaaggcctctccagaaattagtttg
gaagtggaatccgagcttgccaattttgagagaaactatgactgggacgctgctgtggag
tgggtcaccaaagcaggggatccaagtgctcaatcattacctgccaatgattggtatcgt
ttacgtcgcaagcttgaaatcgtcaagtctactgggttacctccttcagcttttccagta
ccatatgaaactttcaaagaacagattgattcacatacaaaggaccttgacattgacatt
tctactgaagggattctggctgaaaagcagaaggatttggattatgattttatttgcttt
tttctttcaacatcaagattggatctctataggtcaattgacttcaggtgtgaagatatg
atttcaggaaatgatggcattttgtccgaggcaagatggcttctcgatatgggtcttcag
ccaaattcaaattctgcaacacgagcaataggttacagacaggctatggaatacctttta
aagtgtgaagaacaagggggcagaagttcagaacgcgacttctatgcttttctatctgaa
tttcagaaagcatcaaggaattttgcaaaacgacagttaacatggttccgcaatgagcca
atttatcactgggttgatgcttcgagaccccttgaagaggtgctcgagttcatatataac
gcataccatgatcaaactgggaaattagcagtccctcgatcactttcaatgaaaaaagat
atgtcagatcgacgagaaattgctcaactaaaaatctatcgacctcaaagagggcttttc
accagccacgaggcttgttcggatgttctcaactgggtaagtaataatcaaaggcaaaag
accgagttgattgctaaatag
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