Cynara cardunculus var. scolymus (artichoke): 112501048
Help
Entry
112501048 CDS
T05604
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112501048
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112501048
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112501048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-ANAPC11
zf_RING_Vps8
zf-RING_Vps41
zf_PCFS4
DUF4187
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112501048
NCBI-ProteinID:
XP_024960456
LinkDB
All DBs
Position
LG_17
Genome browser
AA seq
495 aa
AA seq
DB search
MGQHLEPQQVHPHAEPCMVSYGGVTCYPQPFNSRTIIPPPGNRTGFDPRYLPENHGWLPY
VITQYNGEHCNTFMVPSGVFPVPINQGVHDHLPFSNNHQIFERNRSLVMEGPNDAFKRKN
IEGFPRNFPGFYRTPGSSSSVATSEGTMMDATSYGAHNDIRLGMEGGLNRGGRNRATGVM
GFDHVGVHNNNRLIHGGQPTQTVPTPLLDQHGANGAFPWNRAHGVPYLQGCINGDGMEAA
NMGIHGYQVATMSRNSSAYMHPPPITSHQGSHNLYHPPPLPPMPPPVQAQNMDVHLHLAS
TSHRHSISTSTGNPFQHMVDPGPRFVVPTPPNGLRIYEAHRRELMIESTARHRSFPNLRV
LPEDGVAILDISDYHEVGHLVDHHNDMRLDIDHMSYEELLALGEQIGNVGSGLSETSISD
HLKTRTFRSCNPEDPLPADEEHNFCVICQTEFEDQEKIGVLDCRHDYHSECIKKWLTVKN
TCPICKSTAIALITN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggacaacatttggaaccgcaacaagtccatcctcacgctgaaccttgtatggtatca
tatggtggggtaacatgttatccgcagccttttaacagtcgcacgataataccacctcca
ggaaacagaacgggttttgatcctcgttacctgccagagaatcacgggtggctgccgtat
gtgatcacccaatacaacggtgaacattgcaatacgttcatggtaccttccggagttttc
cctgttccaattaatcaaggggttcatgatcatttacccttttcaaacaatcatcaaatc
tttgaaaggaacagaagtctagttatggaaggacctaatgatgcatttaagagaaagaac
attgaagggttccctaggaattttccgggtttttaccggacacctggctcgagttcttcg
gttgccacctccgaggggacaatgatggatgcgacatcttatggggctcacaatgatatc
cggttgggcatggaaggtggacttaaccgaggtggcaggaatagagccacgggtgttatg
gggtttgaccatgtgggagtgcataacaataaccgtttgattcatggtggtcaaccgact
caaacagttcctactcctctgttggaccagcatggtgctaatggcgctttcccatggaat
cgcgctcatggtgtaccctacctgcaaggatgtatcaatggagatggtatggaggctgca
aacatggggattcatggatatcaagttgcaaccatgagtagaaactcctcggcttatatg
catcctcctcctatcacatctcatcaagggtcccacaatctctatcatccgccaccattg
ccacctatgccgccaccggtacaagcccaaaacatggacgtccatttgcatctagcatca
acttcacataggcattctataagcacctccaccggaaatccttttcaacacatggttgat
ccggggcctaggtttgtggttcccacaccaccaaatggccttagaatatatgaagctcat
cgacgagaattgatgatcgagtccaccgcaagacatcgtagcttccccaatttaagagtt
cttcccgaagatggagttgcaatccttgatatttccgattaccatgaagtaggacactta
gttgatcatcacaacgatatgcgcttggatatagaccacatgtcttacgaggagcttctt
gcactaggggaacaaattggaaatgttggctcgggcttgtcggaaacttctatttcggat
catctgaaaacgagaactttcaggtcttgtaatccggaagatccgttgcccgctgatgaa
gaacataatttctgcgtaatttgtcagacggagttcgaagatcaagaaaagatcggggtg
ctcgattgtcgccatgattaccattcggaatgcatcaaaaagtggttgacggtgaagaac
acctgccccatttgcaagtcgactgcaattgctcttattacaaactaa
DBGET
integrated database retrieval system
