Cynara cardunculus var. scolymus (artichoke): 112501142
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Entry
112501142 CDS
T05604
Name
(RefSeq) la-related protein 6C-like isoform X1
KO
K15191
La-related protein 7
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112501142
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
112501142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
HENMT1_C
U_exon
Motif
Other DBs
NCBI-GeneID:
112501142
NCBI-ProteinID:
XP_024960579
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Position
LG 17
Genome browser
AA seq
415 aa
AA seq
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MAQAQPEEKLQENREKETSKKDEKREISNSPSFKLNAHAPEFVPSSHTQIPVSGYFYPCF
SYLGVGGNDGSGSADWVYVGGGDQDQQVQFFSNPDVVIPNCSRNCLTEDLQQKIIKQVEC
QFSGLSLLANESLVKHISKDPEGYVPISVIASMKKVKSCITNHHLLAQALCSSTKLVVSN
DGKKVRRKHPFTEKDKEELQSRTVVAENLPEDHSHQNLEKIFSVVKSVKAIRICHPPEPN
SSRSRGDYVFSNKLHALVEYETAEMAEKAVDKLNDERNWRKGLRVRLLIRRSPKSVLKSR
KSEFDELLDDESDEAYDASEESSQTNVIEVAVDNNAEEGSRKGWGRGRGKSKLRTPTHNG
RGVLSQSPQTSGSPYSETSSTKQSSPKGPRMPDGTRGFTMGRGKPMSPPALTTTP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcacaaccagaagaaaaattgcaggaaaatagagagaaagagacatccaag
aaggatgaaaaaagggaaatttctaattctccttcttttaaactcaatgcacatgctccc
gaatttgtgccaagttcgcatacccagattccggtttctggttatttttatccctgcttt
agttatctgggtgtgggtgggaatgatggcagtggatcggctgattgggtttatgttggt
ggcggtgatcaagatcagcaagtgcagtttttctccaatcctgatgttgtgatccccaat
tgttcgaggaattgcctcactgaggatcttcagcaaaaaatcatcaaacaggtggagtgt
caattcagcggcctgagcctacttgcgaatgaatccctggtgaaacacattagtaaggac
cctgaaggctatgttcctatatctgttattgcatctatgaagaaagtcaaatcttgcatc
actaaccatcatttgctcgctcaagctctttgctcatccacaaagttggttgtaagcaac
gatggcaaaaaagtgaggcgtaaacaccccttcacggagaaagacaaagaagaattgcag
tctcgcactgttgttgctgagaatcttccggaagatcattctcatcaaaaccttgagaaa
atctttagtgtggtcaaaagtgtcaaagccattcgtatttgccatccccccgagcctaat
tcttcacgttctagaggagattatgtttttagtaacaagctccatgctttggtggagtat
gaaactgcagaaatggctgagaaagcagttgataagttaaatgatgaacgcaattggcga
aaagggctgagagttaggttgctgattcgacgttcaccaaagtctgtattgaagagcagg
aagtcggagttcgatgagttacttgacgatgaaagtgatgaagcatacgacgcgtctgaa
gaatcttctcaaacgaatgtgattgaagttgctgtcgacaataatgcggaagagggttca
aggaaaggatggggacgaggacgtgggaagtcaaagttacgcacgccgactcataacgga
cgtggggttctttcacaatcaccacaaacaagcggttcgccgtattcggaaacatcatca
accaaacaaagtagtccaaaaggtccaagaatgccagatggaaccagggggttcaccatg
ggaagagggaagccaatgtctcctcctgctctaaccaccacaccataa
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