KEGG   Cynara cardunculus var. scolymus (artichoke): 112501156
Entry
112501156         CDS       T05604                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112501156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112501156
   03041 Spliceosome [BR:ccav03041]
    112501156
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112501156
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112501156
Spliceosome [BR:ccav03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112501156
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB Spo7_2_N BRAP2 RL
Other DBs
NCBI-GeneID: 112501156
NCBI-ProteinID: XP_024960594
LinkDB
Position
LG 17:336025..339844
AA seq 344 aa
MGSKSKSDNPHSGDGASLGKIFIGGLPKDTQYNAFNNHFAKYGDITDSVIMKDRHTGQPR
GFGFITYADPSVVDKVIEDTHVFNGKEVEIKRTIPRGSAHSKDFKTKKIFVGGIPTTLTE
DELKNFFSKHGKVAEHQIIRDHGTDRSRGFGFVIFDSEEVVDELLSNGNMIDMDGTQVEI
KKAEPKKAPNHPPPSFGSRSRARSFSDEFGGFGRSYDGFDGGYGPPSYRTPGGLGRPGGY
GGYGSGGRDFGGYGDFGDSTLGGYRGEPSLGYGSRFGSYGGGYGGGYGGSGLGGYGRGEG
YGYGGPGYGGGYDSGPGSSYGGASSLYGRGGGYSGSSRYHPYAR
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgggatcgaaatcgaagagtgataatccccactctggcgatggtgcaagccttgggaaa
atcttcatcggaggcttaccaaaagatactcaatacaatgctttcaataaccactttgcg
aagtatggagatattactgattctgtgataatgaaagatcgtcatactgggcaacctagg
gggtttggattcatcacatatgctgatccttcagtggtagacaaggttattgaggatacc
catgtctttaacgggaaggaggttgagatcaagagaacaatcccgagaggatctgctcat
tcaaaggattttaaaacaaagaagatatttgtcggaggtattccaaccacacttactgaa
gatgagctcaagaatttcttttccaagcatgggaaggtggcggagcaccagattatacgt
gatcatggcacagaccgttcgcgtgggtttgggtttgttatatttgatagtgaggaagtt
gttgatgaattgttatccaatggaaacatgattgatatggatggtactcaggtggagatc
aagaaagcagagccaaagaaagccccaaaccacccacctccttcatttggtagcaggtct
agggcacgttctttctcagatgaatttggtggatttggccgctcatatgatggttttgat
ggtggatatggacctccttcttatagaacacctggaggtcttggaagacctggtgggtat
ggcgggtatggtagcggtggtcgtgattttggtggttatggagattttggagatagcacc
ctaggtggttaccgtggtgaaccatctcttggttatggtagtcgcttcggtagctatggg
ggtggttatggtggtggttatggtggaagtggtctagggggttatggcagaggtgaaggg
tatggctacgggggtcctggttatggtgggggttatgattctggtccaggttctagttat
ggaggagcaagcagtctatatggcaggggaggaggctatagtggcagtagtcggtaccac
ccttatgcaagatag

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