Cynara cardunculus var. scolymus (artichoke): 112501180
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Entry
112501180 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112501180
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112501180
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112501180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Prok-RING_4
TerY_C
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112501180
NCBI-ProteinID:
XP_024960630
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All DBs
Position
LG 1:12201917..12208451
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AA seq
477 aa
AA seq
DB search
MGAKTSRDEDASYNPASYRPASSFSGNQYDNYPQPSYSHPPQDDHNYPIQEAYPAYPQEH
YPAPAATIPTATPAPAPAPALAYPPSHRPQNKFDRRYSTIADSYNSLEQVSEALARAGLE
SSNLILGIDFTKSNEWTGSRSFHRKSLHHIGEGLNPYEQAISIIGKTLTAFDEDNLIPCY
GFGDASTHDQDVFSFYPEERCCNGFEEVLSRYREIVPHLNLAGPTSFAPVIEKAMTIVEE
SRGQYHVLVIIADGQVTRSVDTERGRLSPQEQKTVDAIVEASKLPLSIVLVGVGDGPWDT
MKEFDDNIPSRSFDNFQFVNFTEIMTKNVPHIRKETEFALAALMEIPIQYKATIELSILG
SRKGISPRRVALPPPVHIAPSFSSSKPSHSAGFQDPQSYFDQSSPVTATPYYAPTNLERT
APPVPNSTYENQLCPICLTNPKDMAFGCGHQTCYECGQTLKLCPICRSKIETRIKLY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaaaacttcaagggacgaggacgcgagttataatcctgcatcctatcgacca
gcttcgtctttttctggaaatcagtacgacaattaccctcaaccatcttattcacaccca
ccgcaagacgaccataattaccccattcaggaggcatatccagcatatccacaagaacac
tatcctgcacctgcggcaacaattccaactgcaactccggctcccgctccagctccagcc
ctagcctatcctccatcccatagaccccagaataagtttgacaggagatattcaacgatt
gctgatagttacaattcattggaacaggtgagtgaggctctagcacgtgcagggcttgag
tcctctaacctcattcttggtattgacttcacaaagagcaatgagtggacaggttcaagg
tccttccacagaaaaagtctgcatcatattggagaaggtttgaatccatatgaacaggcc
atatccattattgggaaaactttgacagcttttgatgaggataacttgattccctgttac
ggatttggagatgcatccacacatgatcaagatgttttcagcttttatccagaagagagg
tgttgtaatggatttgaggaagtcttgagtaggtacagggagattgtaccccatctaaat
cttgcaggcccgacatcgtttgctcctgtcattgaaaaggctatgaccatcgttgaagaa
agcaggggacagtatcatgtgttggttatcatcgctgatgggcaggtaacaagaagtgtg
gatactgaacgtggtcgattgagtccacaagaacagaaaactgtagatgccattgtcgaa
gcaagcaagcttccactctctattgtattagttggggtcggtgatgggccttgggacaca
atgaaggaatttgatgataacatcccttctcgcagctttgacaatttccagttcgtgaat
ttcactgaaatcatgaccaagaatgtgcctcacatccgaaaggagacagaatttgctctt
gcagcattgatggaaattcctattcaatataaagcaacaattgaactgagtatactcggt
agtcgcaaaggaatttctccccggagggtcgccctgcctcccccggttcatattgcacct
tcttttagtagctcaaaaccatcacattcagctggttttcaggacccgcaatcttatttt
gaccaaagcagtcccgttactgctactccttattatgctccaactaatctagagcgcaca
gccccacccgttccaaattctacctacgaaaatcagctatgccccatttgccttactaac
ccaaaggatatggcttttggctgtggacatcagacgtgttacgagtgtggacaaacgctt
aagttgtgcccgatctgtcggagtaaaatcgaaactagaataaagctctactaa
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