Cynara cardunculus var. scolymus (artichoke): 112501208
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Entry
112501208 CDS
T05604
Name
(RefSeq) heat shock protein 90-6, mitochondrial
KO
K09487
heat shock protein 90kDa beta
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112501208
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112501208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112501208
04131 Membrane trafficking [BR:
ccav04131
]
112501208
Chaperones and folding catalysts [BR:
ccav03110
]
Heat shock proteins
HSP90
112501208
Membrane trafficking [BR:
ccav04131
]
Autophagy
ER-phagy
ER stress-related proteins
112501208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP90
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112501208
NCBI-ProteinID:
XP_024960666
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Position
LG 17:complement(3493099..3500613)
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AA seq
794 aa
AA seq
DB search
MHRLSRRSVNSLLRYGGHRHRDAMPVASIGSSSINELGGERDASGRRYSILTHLTSNGPA
STKPLKSGNMIPIGKRYESTAADISATDTPVEKYEYQAEVSRLMDLIVNSLYSNKEVFLR
ELISNASDALDKLRFLSVTEPQLLEGAAELDIRIQTDQDNGIITLTDSGIGMTHQELVDS
LGTIAHSGTAKFLKALKDSKDAGSDSNLIGQFGVGFYSAFLVADKVVVSTKSPKSDKQFV
WEGEANSSSYIVREETDPEKMIPRGTRITLHLKRDDKGFAHPERIEKLVKNYSQFVSFPI
YTWQEKGYTKEVEVDDDPAEAKKDGTDDGVEKKKKTKKIVEKYWEWDLTNETQPIWLRNP
KEVTTEEYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILYVPAITPMGKEDIVNPKTKN
IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRVVRIMRKRLVRK
AFDMILGISMSENREDYEKFWENFGKHLKLGCIEDRENHKRLAPLLRFFSSQSEEEMISL
DEYVENMKPDQKDIYYIAADSVTSAKNTPFLERLYEKELEVLFLVDPIDEVAVTNLKSYK
EKNFVDISKEDLDIGDKNEEKEKEMKQEYGHICDWMKKRLGDKVASVQVSNRLKTSPCVL
VSGKFGWSANMERLMKAQTVGDSSSLDFMRSRRVFEINPEHSIIQTLNAACRSSAEDEEA
LRAIDLLYDTALISSGFTPESPSQLGGKIYEMMNMALSNKWSLQTQEAEIVAEPQATLEA
EVVEPIETTTGSQK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggctatctaggcgttctgtcaactctctcctccgctacggtggccatcgccac
cgtgatgccatgcctgtggcctccattggttcttcaagtatcaacgaattgggtggagag
agggatgctagtggcagaaggtattcgattttaacgcatttgacaagcaatggacctgct
tccaccaagcctttgaaatcaggaaacatgattcctataggaaagcggtatgaatcaact
gctgcggacatttcagcaactgatacacctgtggagaagtacgagtatcaagctgaggta
agccggcttatggatctcattgttaacagtctatatagcaacaaagaggtgttccttcgg
gaacttatcagcaatgcaagtgatgccttggacaagctgcgctttcttagtgttactgag
ccacagcttttggagggtgctgctgaacttgacatacggattcaaactgatcaagacaat
ggaataattactctcacggactctggtattggtatgacgcaccaagaacttgttgattcc
cttggaacaattgcccacagtggaactgcaaagtttctaaaagctttaaaggatagcaaa
gatgctggttctgacagcaatttgatcggtcaatttggtgtgggattttattctgccttc
ctggttgctgataaggtggtggtctcaacaaagagtcccaagtctgataagcaatttgtt
tgggaaggagaggccaattctagctcctatattgtccgagaagagactgatcctgagaag
atgattcctagaggaactcgcattacattacatctcaagcgtgatgataaaggttttgct
catccggagagaatcgagaaacttgttaaaaattattcgcagtttgtgtcatttcctatt
tacacatggcaagaaaagggctacacaaaagaggttgaagttgatgatgatccagctgag
gccaagaaggatgggactgatgacggtgttgagaaaaagaagaaaacaaaaaaaattgtt
gagaaatactgggaatgggacctcactaatgagacacaacctatatggcttcggaaccct
aaggaagttactacagaggaatataatgaattctacaagaagacgttcaacgagtacttg
gaacctttagcatcttcacatttcacaacagagggagaggtggaattcagatcaatcctt
tacgtgcctgcaatcactcccatggggaaggaagacattgtgaacccgaaaactaagaat
ataagactctatgtgaaacgtgtcttcatttcagatgactttgatggagaactgtttcca
cgatacctaagctttgtcaaaggtgttgtcgactctaatgaccttcccttgaatgtatca
cgtgaaattctccaagaaagtcgtgttgtacgtataatgaggaagcggttggttcgaaag
gcatttgacatgattcttggcatatctatgagtgagaaccgagaggactatgagaagttc
tgggagaactttggaaagcatttgaaacttggatgcattgaagatcgtgaaaatcacaaa
cgtcttgctccattgcttcggtttttctcgtcacagagtgaagaagagatgattagcttg
gatgaatatgttgagaacatgaaacccgaccaaaaggatatttattacattgctgctgac
agtgtcacaagtgcaaagaacacccccttcttggagagactatatgagaaggagctcgaa
gtactatttctagttgatcccattgatgaagttgctgtcacaaatctcaaatcgtacaag
gaaaagaactttgttgacatcagcaaggaagacttggatattggtgacaagaatgaggag
aaggaaaaggagatgaagcaggaatatggacatatttgtgactggatgaagaaacggttg
ggtgacaaggttgcgagtgtccaagtttcaaatcgtctaaaaacatctccttgtgttctt
gtatctggaaagtttggttggtctgcaaatatggagaggctgatgaaggcacagaccgtt
ggtgattcttctagcctggactttatgagaagcaggagagtgtttgagatcaatcctgaa
cattcaatcattcagacattgaatgctgcttgcaggagcagtgcagaagatgaagaagcc
ctaagagctattgatcttttgtacgatactgcattgatttctagcggtttcactccggag
agtccatcgcagcttggggggaagatttatgaaatgatgaatatggctttatcgaacaaa
tggagcttacagacacaagaggctgaaatagtggctgagccccaggcaaccctcgaagca
gaggtagttgagccgattgagaccaccaccggttctcagaaatga
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