KEGG   Cynara cardunculus var. scolymus (artichoke): 112501475
Entry
112501475         CDS       T05604                                 
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccav03009]
    112501475
Ribosome biogenesis [BR:ccav03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    112501475
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 Beta-prop_EML WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 112501475
NCBI-ProteinID: XP_024960884
LinkDB
Position
Unknown
AA seq 521 aa
MMKGKKFNNTKKNQNGHKSKRFKSDKPDPFFDGDSKRRRNFEDNDDDSIKSSDSDDYDDR
EVAAAVDDDDDVAGTELGAEETAAEKRKRVAEAYLEKMRAAARREEEEGEEYEVDERGGG
EGGERDSLVARMLQAQQLEDSGRVRKLIASRVQNPKTMDGFDVLVKHRQSVTAVVLSEDD
SKGFSASKDGYIVQWDVNSGKTEAYAWPSEDVLKSHGAKDPQGRAKKRSKHVLALAVSSD
GRYLASGGFDRHIHLWDTRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNA
EDRTYITTLFGHQSDVLTIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASLLECCC
FISNDEFLSGSDDGSIEHWSVMRKKPLHIVKNAHPTLTPNKLDGVQNGDLSNGSEDNLHP
VPEKLCSSAHSWVSSVAVCRGTDLAASGAGNGVVRLWEIESDAKGIRPLFELPLVGYVNS
LAFAKSGKFLVAGVGKEPRLGRWGCVPAARHGVALHRFQLS
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgatgaaaggtaaaaagttcaacaacactaagaagaatcaaaatggccataaaagcaag
aggtttaaatcggacaaacccgacccgttctttgacggcgattccaagcgccggaggaat
tttgaagacaatgatgatgacagcattaagagcagtgattccgacgattatgatgaccga
gaagtggcggcggcggtggatgatgatgatgatgttgctggaactgaattgggggcggag
gagactgcggcggagaagcggaagagagtagcggaggcgtatttggagaagatgagagcg
gcggcgaggagagaagaggaggaaggtgaagagtatgaggtggatgaaagaggtggtgga
gaggggggagaaagggattctctggttgcacggatgttgcaggcacaacaacttgaagat
agtggtcgtgttcgtaaattgattgcttcaagggttcaaaatccaaaaacaatggacgga
tttgatgttttagtgaaacaccgacagtctgtaactgccgtggttttatcagaagatgat
tctaaaggattttctgcttctaaggatggctatatcgtccagtgggatgtgaatagtggg
aagaccgaagcatacgcttggcctagtgaggatgtattgaagtctcatggtgccaaagat
ccacaaggtcgagctaaaaagcgtagtaagcacgttttagcgctggctgtaagctctgat
ggtcggtatttggcaagtggaggctttgatcgacatattcatctatgggatacacgtaca
cgggaacatattcaggcttttccaggccataaaggacctgtgtcatgcttgacatttagg
caagggacttcggaattattttctggttcatatgatcgaaccatcaagatatggaatgca
gaagacagaacttacataacgacattgtttggtcatcaaagtgatgttttaactatcgat
tgcttaagaaaagaacgggtgctaactgttggtcgtgaccgaaccatgcacttatggaag
gttcccgaggagtcacaattagtctttcgtgctcctgcatcattattggagtgctgctgt
tttattagtaatgatgaatttttatcgggctcagatgacggtagtattgagcattggagt
gtaatgcgaaagaagccccttcatattgtaaaaaatgcacaccctacattgaccccaaat
aagcttgatggagtacaaaatggtgatttatcaaatggtagcgaagataatttgcatcct
gttcccgaaaagttgtgctcgtctgcacattcctgggttagttctgttgctgtatgtaga
ggcactgatcttgcagcatcaggagccggtaatggtgtcgttcgtctgtgggaaatcgaa
agtgatgccaaaggcattcgcccactttttgagctgccattagtcgggtacgtgaattct
ttggcgtttgccaagtcggggaaatttttggttgctggcgttggcaaggaaccccgattg
ggtcgatgggggtgcgttcctgctgctcgtcatggtgtggctttgcaccgtttccagctc
tcatga

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