Cynara cardunculus var. scolymus (artichoke): 112501513
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Entry
112501513 CDS
T05604
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112501513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112501513
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112501513
mRNA degradation factors
5'-3' decay
Decapping complex
112501513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
112501513
NCBI-ProteinID:
XP_024960927
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSQNGKLMPNLDQNSTKILNLTVLQRMDPYIEEILITAAHVTFYEFNVDLNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTENLVEDLLGDFEYELQVPYLLYRNAAQEVNGIWFYNP
RECEDVANLFTRILGAYSKVPPKPKVNKSEFEELEAVPTSAVIEGPLEPPFTTSSSTDVP
EDSSFANFFGNAMNLGHHASNSVNSMQSYHSLTAVPLHSRVASSPALNGTALQIPSLSSS
TPGMPIHDNPDTVNSSNHVHVTNLIKPLSFFTPSSSSSPLMPQPVPKSMPVAPLQPPLNT
QRNHGIPLLQPFPPPAPPPSLTPGSGSAPNYGSLSREKVRDALLILAQDNQFIDMFHQAL
LKVQQQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaatgggaaattgatgcccaatctggatcaaaacagtacaaaaatccttaac
cttactgttcttcagagaatggatccttacattgaggagatcttgatcaccgccgctcat
gttaccttctacgaattcaacgttgacctcaatcaatggagtcgcaaggacgttgaaggg
tctctctttgtcgttaagaggaacacccagccaaggtttcagtttattgtaatgaatcgg
cgaaatacagaaaatcttgttgaagatcttttaggggattttgagtatgaacttcaagtt
ccatatctactgtatcgaaatgctgctcaagaggtcaatggtatttggttctataatcca
cgtgagtgtgaagatgttgcaaatctgttcactaggatactcggtgcatattcaaaagtc
cctcccaagccaaaagtgaacaaaagtgagtttgaagaacttgaagctgtacctacttct
gctgtaattgaggggccactggaaccaccatttactacttcgagttctacagatgtccct
gaggattcttcatttgcaaacttctttggtaatgctatgaatttgggacatcatgcttcc
aattcggttaattccatgcagtcttaccatagcttgacagcagttcctttacactctcgt
gttgcatcttctcctgcgcttaatggaacagcactgcaaatcccgtcactttcttcatcc
acacctggaatgccgatccatgacaatccagacacagtcaacagcagtaaccatgtccat
gtcaccaacctcattaaaccgctttctttttttacaccctcctcatcttcatctccattg
atgccacaacccgttcctaaatctatgccagttgctccgcttcagcctccactgaacaca
caacgcaaccatggtattccgttactccaaccatttcctccacctgcaccacccccatcc
cttacccctggttccgggtccgctccaaattatggatcgttaagcagggaaaaggttcgg
gatgcgcttctaatccttgcccaggataatcaattcatcgacatgtttcaccaagcctta
ttgaaagtacagcaacaatga
DBGET
integrated database retrieval system
