Cynara cardunculus var. scolymus (artichoke): 112501655
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Entry
112501655 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112501655 isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112501655
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112501655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
PspA_IM30
P4Ha_N
DUF7691
Motif
Other DBs
NCBI-GeneID:
112501655
NCBI-ProteinID:
XP_024961119
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All DBs
Position
LG 1:11355222..11364437
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AA seq
529 aa
AA seq
DB search
MGSTFNPQILVEKLAKLNNSQQSIETLSHWCIFHMNKAKQVVETWARQFHSSPRDQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIDNGDEFGRNSALRLVNILDERKVFGS
RGQVLKEELVGRHLETSNKNGKHSGLKLKRPAGDALDKIVSGYQVIYAGQVNEDAVMSKC
RNAISCVEKVDKEIGGDIRSAKVNGPGVADELKGQHATLRDCIEQLTTVESSRTNLVSCL
REALQEQEMKLGQVRSQLQAAHTQSEKADNFCRQLIKNPNGIQSPSEQGRKETHPSKVQS
YVPGTGEQSAPVMYTRQIPFGEQSEEDTKSAAAAVAAKLTASTSSAEMLTYVLSSLASEG
VIGNSRKESPSNDYPLQKRTKINNDQPPPYIPSSQNAQPPVPPFPHPDSLQHGNNSRGGG
ILKEPSHDQPPPPPPPSSPPPLPPMPPMQPYPVPPFMQSAGTVPYGHNTNQPPPPPPMPL
PGFPSVGPPVNGVSSYTPALPPDGYQNYQIEGGFYSQQSAMPMAPMSRQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtacatttaatccacaaattttggtggagaagctggccaagctcaataattca
cagcaaagcattgagactctgtcgcactggtgtatttttcatatgaacaaggctaagcaa
gttgtagaaacatgggctagacaattccattcttccccgcgtgatcaacgcctggctttt
ctctatcttgcaaatgatattctgcagaatagtaggcgcaagggttcagagtttgttggt
gaattctggaaggttcttccagatgcactccgtgatgtgattgacaatggggatgaattt
ggaagaaattcagcattacgcctggtcaacattttggatgaaagaaaggtttttggttct
cgagggcaggttcttaaggaagagctagtcggaaggcacctggaaaccagtaataaaaac
gggaagcattcagggctaaaattgaaacgacctgctggagatgcattggacaagatagtt
tctgggtatcaagttatatatgccggtcaagtaaatgaagatgccgttatgagcaaatgc
aggaatgccatcagctgtgttgaaaaagtggacaaggaaattggtggggatattagatct
gcaaaagtaaatgggccaggtgttgccgatgaactgaagggccagcatgctacattgcgg
gattgcattgagcaacttacaacagttgaatcatcaagaacaaatctcgtgtcttgtctg
agggaggctcttcaagaacaggaaatgaaactgggccaagtccgtagtcaacttcaggct
gcacatactcaatcagaaaaggccgataatttctgcaggcaattaattaagaatcctaat
ggcatccaatcgccatctgaacagggtcggaaggaaactcacccatccaaagtgcaaagt
tacgttccaggcactggagaacagtctgctcccgtgatgtacacacgacagatacctttc
ggtgagcaatctgaggaggatactaaatccgctgcagctgcagtggcggcaaagctcacg
gcatcgacatcctcggcggagatgctgacatacgtcctctcatccttggcgtcagagggc
gtaattggcaattcacggaaagagtcgccctcaaatgattatcccttgcagaaaagaacc
aagatcaataacgaccagcctccgccttatataccatcatctcagaatgctcaaccaccg
gtgccgcctttcccccacccagattctttacagcatggtaataatagccgtggtggtggc
atattgaaagagccgtctcatgaccaaccaccacctccacctccgccatcatctccgcct
cctctgccaccaatgccacctatgcagccatatccagtccctccattcatgcagtctgct
gggacggtaccatatggccataatacaaatcaaccaccaccgccaccacctatgcctcta
cccggatttccctccgtggggccgccagtcaacggtgtttcatcatacacaccggcactt
ccaccggacggttaccagaattatcaaatagaaggtggtttctatagccaacaatcagcc
atgccaatggcacctatgtctaggcagtaa
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