Cynara cardunculus var. scolymus (artichoke): 112501769
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Entry
112501769 CDS
T05604
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112501769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112501769
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112501769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
112501769
NCBI-ProteinID:
XP_024961251
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MTVEEIRGVVAGNNEINRFPIGMRVLAVDDDPTCLKLLDGLLRKCQYQVTTTNQAITALK
MLKENRNRFDLVISDVYMPDMDGFKLLELVGLEMDLPVIMLSGNSDPKLVMKGITHGACD
YLVKPVRLEELRNIWQHVIRRKVESKPQSKSNNNHEKSNQGNEGGDQNVKLNRKRKDEDE
DVEENGHESDDDPSSQKKPRVVWSIDLHRKFVAAVNQLGDEKAVPRRILDLMNVDGLTRE
NVASHLQKYRLYIKRISHQANMVAAFGGSKDASSYMRMSPLEGLGDFRILSSSGRLSNAA
YAPSGILGRLNSATGVTLHSLMAPPLVQPNHTQNKLQPVNHQNMNLFQEIPSSFDQCSNK
PNTQLTDFSSIEESRIFTGNKLVDFNSIDESRMFTGSNPLMDPSVGLGSKSLKLSSTGSE
SFNLLSSSSNFLDQNGNQPPNFSSNQLPVGGNYGYSATVKGGICSNITTTDTIPLEAHGG
GLVDEIVQNVNNQSLSNQKNGQYSKQDYSQYSQNAFSTLASLALASGGGGGLSGPLSHGG
LNGGTSALFKTEMPSLEMKMRSSEDGLVVNNGYGSLDGLMTGMMKRVRSFPLCIYVCVKN
LESHSIFSSNQHATLILYQDWTFTSESIFSHRKWGCFKNQAFNRKNRCQQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaggaaattagaggggttgtggcgggtaataatgaaatcaataggtttccc
attgggatgagagttctggctgttgatgatgatccaacttgtttgaaattattggatggg
cttctaagaaaatgccagtatcaagttacaaccacaaatcaagcaataacagcactgaag
atgttgaaggaaaatagaaacaggtttgatttggtcatcagtgatgtatatatgccagat
atggatggtttcaagcttcttgaactagttggcctcgaaatggacttacctgtcatcatg
ctatcaggaaacagtgatccgaagcttgtaatgaaggggatcactcatggtgcttgtgat
tatcttgtgaagccagttcgccttgaggaacttcgcaatatatggcagcatgtgatcagg
cgaaaggtggagtcaaaaccgcagtcaaagtcaaacaacaaccatgaaaagtcaaatcaa
gggaacgaaggtggagatcagaatgtgaagctgaatagaaaaagaaaagatgaagacgaa
gatgttgaagaaaatggacatgaaagtgatgatgatccatcatcacagaagaagcctcgt
gtagtttggtccattgatcttcatagaaaatttgttgctgctgttaatcaactgggcgat
gagaaagctgtgcctagaaggattcttgatttgatgaatgttgatgggcttacaagggaa
aatgtagcaagccatctccagaaatataggctttacataaagaggatcagccatcaagct
aacatggtggcggcatttggggggagtaaagatgcgtcttcttatatgcgaatgagccct
cttgagggactaggagattttcggatattatcaagttcaggaagactgtcgaatgctgca
tatgcgccatctggcattctcggtagactaaacagtgcgactggtgtgacccttcatagc
cttatggctccaccattggtccagccaaaccatacacaaaacaagttacaaccagttaat
catcaaaacatgaatctttttcaggagattccatcatcttttgatcaatgtagtaataaa
ccgaatacccaactcacagattttagttccattgaagaatctcgaatctttacaggtaac
aagttggttgatttcaactccattgatgaatctcggatgtttacaggttctaatcccttg
atggatcctagtgtcgggctggggagtaagtctttgaagctgtcttccacaggctcagaa
tcttttaatctcctttcaagtagttctaactttcttgaccagaatggtaatcaaccacca
aacttttcttcaaatcaactgccagttggcggaaactatggttattctgccaccgttaaa
ggcgggatttgttctaacatcaccactacagacactatacctcttgaagctcatggtggt
ggtttggttgatgagattgtacagaatgttaacaaccagtctttatcaaaccagaaaaac
ggacagtatagtaaacaagattatagccaatactcgcagaatgcttttagcaccctagct
tctttggctctagcaagtggtggtggtggtggtttgagtggtccgctgagccatggtgga
ttaaatggcggtacttcggctcttttcaagactgagatgcctagtttggagatgaaaatg
cgttccagtgaagatggtcttgttgtaaacaatggttatggttcattggacggccttatg
actggaatgatgaaaagggtacgatcttttcctctttgtatttatgtttgtgttaagaat
ctcgagtcccactctatatttagtagcaatcaacatgctactttgattttgtatcaagat
tggacattcactagtgaatcaatcttttcccatcgcaaatggggttgctttaaaaatcaa
gcattcaatcggaagaaccgatgccaacaataa
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