KEGG   Cynara cardunculus var. scolymus (artichoke): 112501859
Entry
112501859         CDS       T05604                                 
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112501859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112501859
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112501859
 Complex B
    112501859
 Complex C
   U2 SnRNP specific factors
    112501859
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5 PH_26
Other DBs
NCBI-GeneID: 112501859
NCBI-ProteinID: XP_024961359
LinkDB
Position
Unknown
AA seq 372 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQATEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIESMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERTLASSNPSTQKSRPHTMFASGPPTLPKVGQPNGAP
VPPRPFANGVVPPVPTIPAIRPPPPPAHVYQPMQMSVPPPQWQQMGQPQGMPPQHLQQFR
PPPPSMPPPPSNMPQMMNRPPPPPAGMAGQHVWRAPPPPQQLTGGHGHPSMMQMSMPPPP
PPNAPPPPPPLG
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgacgactagaatagctccaggggtcggggcaaacttgctaggtcaacactcggcggag
aggaaccaagacgccactgcgtacgttggcaatctcgacccgcaggcaactgaagagcta
ttatgggaattatttgtccaagctggcccagttgttaacgtatatgttcctaaagataga
gtcactaacctccaccaaggctatggctttgtggagttccgcagtgaagaagatgctgac
tatgcaataaaagttctcaacatgatcaagctgtatgggaaacccataagagtgaataag
gcatcgcaagataagaagagcttggatgtaggagcaaacctttttgttggaaatctggac
cctgatgtggatgaaaaacttctttatgatactttcagtgcttttggagtcattgttaca
aatcccaagatcatgagagatcccgagacagggaattcccgtggatttggattcattagc
tatgattcttttgaggcttcagatgcagctatagagtcaatgaacggacaatatctatgc
aatcgccagataacagtgtcttatgcttacaagaaagacaccaagggagagcgtcatggt
accccggcagagaggactttggcaagcagtaatccgagcacccaaaaaagtaggcctcac
acgatgtttgcaagtggacctccgacacttcccaaggttggtcaaccgaatggtgcacca
gtgccgccacggccgtttgcaaacggagtggttcctccggttccaactattccggcaatc
cgtccacctccaccacctgcacacgtctaccaacccatgcaaatgtccgtaccaccacca
caatggcagcagatgggccagccgcagggcatgccgccacagcaccttcagcagttcagg
ccgccaccacctagcatgccgccaccaccttcaaacatgcctcagatgatgaataggccg
ccgccaccgccagcaggtatggctggtcagcatgtgtggcgagcaccacctcctcctcaa
cagttgactggcggtcatggtcacccttctatgatgcagatgtcaatgccgccaccgcca
ccacccaatgctccaccgccacctcctccattaggttga

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