Cynara cardunculus var. scolymus (artichoke): 112501868
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Entry
112501868 CDS
T05604
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112501868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112501868
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccav03037
]
112501868
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112501868
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
112501868
Chromatin remodeling factors
SRCAP complex
112501868
INO80 complex
112501868
INO80 complex (yeast)
112501868
SWR1 complex
112501868
ASTRA complex
112501868
Cilium and associated proteins [BR:
ccav03037
]
Motile cilia and associated proteins
Dynein assembly factors
112501868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_19
AAA_18
Mg_chelatase
bpMoxR
AAA_25
DnaB_C
TsaE
AAA_7
AAA_28
AAA_11
nSTAND3
NPHP3_N
Zeta_toxin
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
112501868
NCBI-ProteinID:
XP_024961382
LinkDB
All DBs
Position
LG_1
Genome browser
AA seq
455 aa
AA seq
DB search
MKIEEVQSTTKKQRIATHTHIKGLGLEATGKAIPLAAGFVGQAAAREAGGLVVDMIRQKK
MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEETESVTGGYGKAISHVIIGLKTVKGTKQLKLDPTIYDAL
IKEKVAVGDVIYVEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLF
IDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVII
RTETYGPAEMIQILAIRAQVEELSIDEESLAYLGEIGQEASLRHAVQLLTPGSVVAKMNG
RESVCKADLEEVSSLYLNAKSSAKLLQEQQDRYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaagaagttcagtctactactaagaagcagaggattgctacgcacacacat
atcaaaggccttggtcttgaggctactgggaaagcaatacctttagctgctggatttgtg
ggtcaggcggcagcaagagaggctggtggccttgtagttgatatgatccgccagaaaaag
atggctggacgggcacttctacttgctggacctcctggtactggtaaaactgctcttgcc
cttggtatctcccaagagcttggtagtaaggtcccattttgtccaatggtcggatcggaa
gtctactcatcagaagtaaagaaaactgaggtcttgatggagaatttcaggagggctatt
ggtttacgtatcaaggaaaataaggaggtttacgaaggagaagtgactgaattatctcca
gaggaaaccgaaagcgtgactggtggatatggcaaagccataagtcatgttattattgga
ttaaaaactgttaaaggaacaaagcaattgaagctggacccgactatttatgatgccttg
attaaggaaaaggtagctgttggtgatgttatatatgtagaagcaaatagtggtgcagtt
aaaagggtaggcaggagtgatgcatttgccacagaatttgatcttgaggctgaagaatac
gttcctcttcctaagggagaggttcacaaaaagaaagagatagtccaggatgttaccctt
catgatcttgatgctgcaaatgcacggcctcaaggcggacaagatatattgtcgctaatg
ggtcaaatgatgaagcccagaaaaactgaaattactgacaaattacgccaagaaatcaac
aaggttgttaatcgctatattgatgaaggggtggcagagcttgtccctggagtcttgttc
atcgatgaggtgcatatgttggatatggagtgtttttcatacttaaatcgtgctttggaa
agctcgctatcgccaattgtaatctttgccaccaatagagggatatgtaatgtgagggga
accgacatgacgagtcctcatggcatacctgtggatctattagacagattggtgattata
agaacagaaacatatggtccggcagagatgattcagatattggccatcagggcacaggtt
gaggaactatctatcgatgaagaaagtttggcttaccttggtgaaattggacaagaagca
tccttgaggcatgctgttcagttgctaacccctggcagcgttgtggcaaaaatgaacggt
cgtgagagtgtttgcaaggcggatctggaggaagtaagcagtctttatctgaatgcaaag
tcatcagcaaaacttctacaagagcaacaagatagatacatctcgtga
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