Cynara cardunculus var. scolymus (artichoke): 112501885
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Entry
112501885 CDS
T05604
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112501885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112501885
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
112501885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_S2
FANCI_HD2
FANCI_HD1
FANCI_S1
Intu_longin_1
Motif
Other DBs
NCBI-GeneID:
112501885
NCBI-ProteinID:
XP_024961417
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MTTANHRNTQPSLTPDDIIRLAQYHTTAPLHPFLLSPTSHDTLVSHLHTLPPSAVSEYTS
SLLSLLSPSPSVSTSTSTSTLLTSLLNSYINLFNSNKIPHDRHSLKTLQLFTAHLDNIPI
TQLQSISDSIVSRLSQINTDPDESQLLDLLPKCFNIIFNSTEIDKPRDSVNALFDRILDC
NWSRVLLVKLVSISRDFQFVDKGRGRQFAEKVFDNMHCVELQDLPSLVYQLLVLASKGFN
KREIIKGIVFFFGTKMHMKKTSYNIVREVEGTALLYVNFAVKQDPSLGQEVMGLVRSDLQ
VIDHFVVGLLLSIARIRRYRESSMGTLKTALSTAYKDYKFSRHCKWLPDGLKEEYLQNAI
LTEKAVLRAVNESNYGREHIVPSIVQLGFVLLESVEEINLKELENTGLVGSQELGIQMLQ
SLFEVHDMARNEIIEQCKFRILSLKPEQSLVIIRLLGSLVQNYSYPMLEYVSHLKELLDY
FGFMHNKVASHLINVLLPLIKFSHNLQDYIILVVRKAMFRRDDHIRLAAAGAIINVILAE
KRSKQNRPCPYQESSSQASSSQVPAIPHGMGSDLFKELSGLLQRCLYQQAKVKERIYWGL
LKLVLVDPLTAGEVFDFLLPHFLQYYKEDGQLGIIQSIKMENGKVCIVEPLDDLLSCVSW
ILILQPQGKSDIRSDSWDSFGFSLTQDTEQAGGTFSGELFSSALLTIRKLLRNENLEGLL
GQMKDPASTPQQGERYKYSAQILSGVIEVILNTLAIELEKATNDKKIDLEKEFVDLVDLY
GSLEKYTSTSAQSTQSNGTRKGIARSSALCLTYKNESDNMKSFKERASFLATPSIHQLFQ
TSFELYKNDAVKSVTTSQVHSQATSNSPNQHSRLFYFILNVTLCQTKSFSYVAKDDPLKA
LIHGDIKVLGPPLLKLIWLLMWPDQKKKDANGKKDNEDRKGLIFLALMCLKELLKVSSQN
LDEMREIEDMLAHAVGEDASRDVLEAEDDDNEQVNGINNQREELFITKIVKPLFSELLHA
KFYHEVEILCDITNMIGSMSSVRSNLLGAWAIYICKTSDVANPKIAKSVVTLALSCTRAP
NDMILACDMALELVKTMGSERQTLLEKSKIYAIINRSTETAIASVLLQLAESVIIDMDRL
SMKLKAYLTGAYKVISLDHDGKQNPYFTLEDTLYQRAEAVVELLSSFVVMNLKDPQAEHL
LRSAAKFYKNLARLSKFHIAPKGCKQILPSLKCQRLVEVTCKQLTEPLYKFVEMMQQKQQ
DSRASKGSINKIKRENRCIPDLIFQIEDYEKYLILLSKASKMNLLRHAKRSTARDFRILD
PQEQEDGANQEAQPDEGAAQDDLVQDSGDASEKALSPETGSTLAAAEDSDENMIPSAKRK
KLGRIVHDSDDEA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctaaccaccgtaacacccagccgtcccttacaccggacgacataatccgc
ttagctcaataccacaccactgctcccctccaccctttcctcctctctccaacttctcac
gacacccttgtctcccacctccacacactccctccctccgccgtctccgaatacacctca
tctctcctctctctcctctcgccatctccttctgtatctacatctacatctacatctacc
ctactcacatctctccttaattcatacatcaatctcttcaattccaacaaaataccccac
gatcgccattctcttaaaaccttacaactcttcactgctcatctcgataacatccccatc
acccaactacaatcaatatcagattcaatcgtttctcgcctttcgcaaatcaacaccgat
ccagatgaatcccagcttcttgacttgcttcccaagtgtttcaacatcatattcaactct
actgagattgataaacctcgggattcagtgaatgcgctgtttgatcgtatcctagattgt
aattggtcaagggttttgttggtgaaactggtttccataagtcgcgacttccaatttgtt
gacaagggacgtgggagacagtttgcagagaaggtgtttgataacatgcattgtgtagaa
ctgcaggatctgccttcattagtttatcagctattggttttggcttcaaaagggtttaac
aagagggaaataataaaaggcattgttttcttctttggaactaaaatgcatatgaagaag
acgagctataatatcgttagggaagttgaagggactgcattgttgtatgtcaatttcgcc
gtaaagcaagacccttcgttgggacaggaagttatggggcttgtgaggtcagatcttcaa
gtgatagatcattttgttgtcgggctattgctgtcaatagcaagaattaggaggtaccga
gagagctcaatgggaacactcaaaacagctctgagcactgcttacaaggattacaagttt
tccaggcattgcaaatggttacctgatggcttaaaggaggagtatctacagaatgccata
ttgacagagaaagcagtgctaagagctgttaatgagagcaattatggaagagagcatatt
gttcctagcatagtgcagctgggctttgtgttgctagaatcagtggaggagataaaccta
aaagaacttgaaaacactggtcttgtgggttctcaagagctggggattcagatgctacaa
agtttatttgaagttcatgatatggcaaggaatgagataatcgagcaatgtaaattccga
atcctttctcttaagcctgagcaaagtttagttatcataagattacttggtagcctagtg
cagaactattcctatccgatgttagaatatgtttcacatctgaaggaattgttagattat
tttggtttcatgcacaacaaggttgcttcccacctaattaatgttctattaccactcatc
aagttcagtcataaccttcaggattacatcatcttggtggtgcgcaaagctatgtttaga
cgagatgatcacattcgcctagctgcagcaggagccattatcaatgtaattttagcagaa
aaacgatcgaaacaaaataggccatgtccttatcaggaatcctccagccaagctagtagt
agtcaagtacctgcaataccacatggaatgggcagtgatcttttcaaagaactcagtggt
ctattacaacgatgtctctaccagcaggccaaagtgaaagagagaatttactgggggctt
ctaaagctggtgctggttgatccattaactgcaggggaagtttttgattttctcttgcct
cactttctacagtactacaaagaagatggtcaacttggtataatccagagtattaagatg
gagaatggcaaagtttgtatagtagaaccactagatgatcttctatcttgtgtctcatgg
attcttatccttcagccacagggaaaatctgacattcgctcagattcatgggattctttt
ggtttctcacttacacaagacactgagcaggcaggaggaacattttctggtgagttgttt
tccagtgctttattgacaattcgcaagcttctaagaaatgaaaatttggaaggcttactt
ggtcagatgaaggatccggcctctacaccccaacaaggagagagatacaaatacagtgct
cagattctatcaggtgttattgaggtgatattgaatacccttgctattgaattggagaag
gcaactaatgataaaaagattgatttggagaaagaattcgttgatcttgttgatctgtac
gggtccttagagaagtatacttctacgtccgcacaaagtacacaaagtaatggtactaga
aaagggatagctcggtcttctgctctctgtctaacatataaaaatgagtcggacaacatg
aagtcttttaaagaaagagcttcttttttggcaactcctagcattcatcagttgtttcaa
acatcgtttgaactgtacaagaatgatgctgtgaagagtgtcacaacttcccaggtgcat
agtcaggcaactagcaattcaccaaaccaacattctagactcttctatttcattttaaat
gtcaccctttgccagacaaaatctttttcttatgtggcaaaagacgatccactgaaggct
ttgatccatggggatattaaggtgctaggaccacccttgttgaaattgatctggttgctc
atgtggccagatcaaaagaaaaaggacgccaatgggaaaaaggacaatgaagatagaaag
ggtcttattttcttagctcttatgtgcttgaaggaactgctaaaggtcagttcacaaaat
ctagacgagatgcgagaaattgaagacatgctggcgcatgccgtaggtgaggatgcatca
agagatgttcttgaagctgaagatgatgacaatgaacaagtgaatgggatcaacaatcaa
agggaagaactcttcatcacaaaaattgtgaaaccattgttctctgagcttcttcatgca
aagttttatcatgaagttgagatcttgtgtgatatcaccaatatgattgggagcatgtct
agtgtaaggagtaaccttctcggtgcctgggcaatatatatttgtaaaactagtgatgta
gcaaacccaaagattgcaaaaagtgtagtcactttagcactatcatgtactcgggctcca
aatgatatgattcttgcttgtgacatggcactggagctagtaaaaacaatgggatcagaa
aggcagactctgttggagaagtccaaaatttatgctataataaaccgttcaacagaaact
gctatagcatctgtgcttttgcagttagctgaatcagtaattattgacatggaccgactc
agtatgaagctgaaggcatacttgactggcgcttataaagtgatatcacttgatcatgat
gggaaacagaacccatatttcacattggaagatactctgtaccagagggctgaagctgtg
gtggaattactttcttcttttgtggtgatgaacctcaaggatcctcaagccgagcatcta
ctgagatctgctgctaaattctacaagaacttagctaggctctcaaaattccatattgca
cctaaaggttgcaagcaaatcttacccagcctcaagtgccagaggcttgtggaagtgact
tgcaagcagctaacagaacctttgtacaagtttgtggaaatgatgcaacagaaacaacaa
gacagcagagcaagtaaaggaagcataaacaagatcaaaagggagaatagatgcatcccg
gatttgatatttcagatagaagactacgagaagtatctcattctacttagcaaagctagc
aaaatgaacttgttaaggcatgcaaagcgtagcactgccagagattttagaatacttgac
ccacaagagcaagaagatggggctaaccaggaagctcaaccagatgagggtgcagctcaa
gatgatttggtccaagactctggagatgcatcagaaaaggcattatcacctgaaacagga
agcacactggctgcagcagaggattctgatgagaatatgattcccagtgcgaagagaaaa
aaactgggtagaattgttcatgactcggatgatgaagcataa
DBGET
integrated database retrieval system
