Cynara cardunculus var. scolymus (artichoke): 112501906
Help
Entry
112501906 CDS
T05604
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g62350-like isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112501906
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
112501906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_3
PPR
PPR_long
PPR_1
ENCP4
MCM_N
Coat_F
DUF5406
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
112501906
NCBI-ProteinID:
XP_024961439
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MIFYFIVFGHLFDLPTGVGMFYSKMSMGYSSVKFQFLQRALDPCGFDKFQVRYATTITCG
LRKPLRVRRRSDGVLSTEAIQAVQSLKLAAKNPSKLDQVFNSKLIRLLKDDLLDAFVELQ
RQQHLDLALKVFEFMRKEAWYEPAHSLYGDLMLMFGKKKLIGEVEKLFSELIEEGLEPDT
RAYTELIGAYLKVDMIEKAMETYELMKASGCIPDELTLTIMIRNLESVGRDDLAVIIKND
CADYLDYPKKFLKEVARKYGIVDYCFLSSRRD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgatattctattttatcgtgtttggacatttgtttgatctcccaactggagtaggtatg
ttttacagcaagatgagcatgggttattcttcagtgaaatttcagtttctacaaagggct
ttggacccctgtggatttgataaattccaagtgagatatgcaacaactataacttgcgga
ttaagaaaacccttgagggtccgaagacgtagcgacggggttttgtctacagaagcaata
caagcagttcagtccctcaagttagctgccaaaaacccatctaaactagaccaagtattc
aattccaagctcattcgtctcttaaaagatgatttgttggatgcattcgttgagttgcag
aggcagcaacacttggaccttgctctcaaggtgtttgaatttatgaggaaggaagcatgg
tacgagcctgctcactctctatatggtgatttgatgttgatgtttggaaagaagaaacta
ataggtgaagttgaaaagcttttctctgagttaatcgaagaaggcttggaaccagacact
agagcctatacagagctaattggagcatatctcaaagtggatatgatagagaaggcaatg
gaaacatatgagttgatgaaggcatcaggatgcatcccagacgagttgacgttaacgata
atgataagaaaccttgaaagtgttggtagagatgatcttgctgtaatcataaagaatgat
tgtgcagactatttggactatccaaagaagtttctcaaagaagttgccaggaaatatggg
atagttgactattgttttctatccagccgaagagattga
DBGET
integrated database retrieval system
