Cynara cardunculus var. scolymus (artichoke): 112502037
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Entry
112502037 CDS
T05604
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112502037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112502037
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112502037
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112502037
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112502037
Exosomal proteins of other body fluids (saliva and urine)
112502037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Ribosomal_L22e
Syntaxin_2
DUF7347
SKA2
Motif
Other DBs
NCBI-GeneID:
112502037
NCBI-ProteinID:
XP_024961619
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Position
LG 1:24576868..24577755
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AA seq
295 aa
AA seq
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MNDLLSRSFSGGRVADIEMANTAAADGVNLDKFFKDVEEIKEELKGLEDLHNQLQESNEQ
SKTLYNAKSIKNLRTKMDNDVALSLEKAKLIKNHLEALDRLSEANRNLPGCGPGSSTDRT
RISILNGLRKQLQSSMKSFTELRQKMAAEHRETVERRYYTVTGEKADETTVDTLISTGES
ERFLQKAIKEQGRGQVMETILEIQERHDAVTVIERHLRELHQVFMDMAVLVESQGEQLND
IESHVNRASSFVRGGAQQLQVARKTQKNTRKWTCFGILLLFIVIAIIVLSIRPWK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctactctcccgatctttttccggcggccgtgttgccgatatcgagatggcg
aacaccgccgcagccgacggtgtaaatcttgacaagtttttcaaagacgtagaggagatc
aaagaagagctaaagggtcttgaagatcttcataatcaactgcaagaatcaaatgaacag
agcaaaaccttatacaatgcaaaatcgatcaaaaacctccggaccaagatggacaacgac
gtcgctttatctctcgaaaaggccaaactcatcaagaaccatctagaagccctagaccgt
ttgagcgaagccaatcgcaacctccctggctgcggcccaggaagctccaccgaccgtaca
cgaatctccatcctcaacggtctacggaaacaactccaatcgtcaatgaagtccttcacc
gaactccgccagaaaatggcggctgagcatcgagaaaccgttgaacggaggtactatacc
gtcactggagaaaaggccgatgagactacagtagataccctgatctcaaccggagaaagc
gagaggtttttacagaaagcaatcaaggagcaaggaagagggcaggtgatggaaacaata
ctagaaatccaagaacggcatgatgctgtaacagtgatagagagacatctgagagaactg
catcaagttttcatggatatggcggtactggtggagagccaaggagaacaactgaacgac
atcgagagccatgttaacagggcaagctcgttcgtaagaggtggtgcacagcagttgcag
gtggcaagaaaaactcaaaagaacaccagaaaatggacttgttttgggattcttttgttg
ttcatcgtcatcgccattatcgttctttctattaggccatggaagtag
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