Cynara cardunculus var. scolymus (artichoke): 112502102
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Entry
112502102 CDS
T05604
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
ccav04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112502102
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112502102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112502102
Membrane trafficking [BR:
ccav04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112502102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
112502102
NCBI-ProteinID:
XP_024961695
LinkDB
All DBs
Position
Unknown
AA seq
218 aa
AA seq
DB search
MVKLTMIARVTDGLPLAEGLDDGRDMQDAEFYKQQVKALFKNLSRGQNEASRMSVETGPY
IFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERGYASQIETAARPYAFIKFDTFI
QRTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRI
YADKARDLNRQALIRKWAPVAIVLGVVILLFWARKKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacgatgattgctcgtgtcactgatggccttcctctagcggaaggactt
gacgatggccgtgatatgcaggatgcggagttctataaacaacaagttaaggctttgttc
aagaacctttcaagaggtcaaaatgaagcgtcccggatgtctgttgaaactggcccatac
atcttccactatatcattgaagggcgggtatgttatttgacaatgtgtgaccgtgcttat
ccgaagaagcttgccttccaataccttgaagatcttaagaatgaatttgagcgtggttat
gcgagtcaaatcgaaactgcagcaagaccttatgcctttataaaattcgacacatttata
caaaggactaagaaattgtaccaggacacgaggactcaaaggaatattgccaagttgaat
gatgaactttatgaagtacaccaaataatgactcgtaatgtgcaggaagttcttggtgtt
ggtgaaaagttggaccaggtgagtcaaatgtcaagccgtttaacctcagaatctcgcatc
tacgctgacaaagcaagagatctaaatcggcaggccttgatccggaaatgggctcctgtt
gcaattgtccttggagtagttatcctactcttctgggccagaaagaagatatggtga
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