Cynara cardunculus var. scolymus (artichoke): 112502110
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Entry
112502110 CDS
T05604
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00900
Terpenoid backbone biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112502110
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccav01006
]
112502110
Enzymes [BR:
ccav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112502110
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112502110
2.5.1.29 geranylgeranyl diphosphate synthase
112502110
Prenyltransferases [BR:
ccav01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112502110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
NapD
Motif
Other DBs
NCBI-GeneID:
112502110
NCBI-ProteinID:
XP_024961707
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MTSLCLVDSWVPTCSMLNGSSSSSFVGFMCTSPLKCGKPHFKNHPRSRFSSSSFSVSAVI
AKEDQEDSSDFQKSSFDFKAYMAEKANLVNKALEESISIKTPPTIHEAMRYTLLAGGKRV
RPVLCIAACELVGGDEYTAMPAACALEMIHTMSMIHDDLPCMDNEDFRRGKPTNHKVYGE
DMAVLAGDLLVVLAFQHVSSVTVRVSPARILAAVAELAKSTGMEGLAAGQMLDIALTGEK
DVGKDELEFISLHKTGAVLEAAVVVGAILGGGNKTQVEKLRKFARCIGLLFQVMDDILDV
TKDSVLDKMTYPKLMGMEKCRQYAEELLAEAKQQLEGFESYKAVVPLVAMAEYIASQXN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttatgtttggttgattcatgggttccaacgtgttccatgcttaatggatct
tcatcttcttctttcgtgggattcatgtgcacatcacctctcaaatgtggtaaaccccat
ttcaagaatcatccaagatccagattttcttcttcttctttctccgtttctgctgtgatt
gcaaaggaagaccaagaagactcctccgatttccagaaatccagcttcgatttcaaggcg
tacatggcggagaaggctaatttggtaaacaaggcgctggaagaatccatttccattaaa
actccacccacaatccacgaagctatgcgttacaccctcctcgccggaggcaagcgtgtc
aggcccgtcctctgcatcgccgcctgcgagctcgtcggtggagacgaatacaccgcgatg
cctgccgcttgtgctcttgaaatgatacacaccatgtcaatgatccacgacgacctccct
tgcatggacaacgaagattttcgccgaggaaaacccactaaccacaaggtttacggcgaa
gacatggcggttcttgccggagacttgctcgtcgtgctcgctttccaacatgtctccagc
gtcaccgtccgcgtgtcgcctgcacgcatcctggctgccgtcgccgaactcgccaagtct
accgggatggaagggttagccgcgggtcaaatgctggacatagctttaacaggggagaag
gacgtcggaaaggacgagcttgaattcatcagcctacacaagacgggggcggttttggag
gcagccgtcgtagtaggggcgatattgggcggagggaacaagacccaggtggaaaagctt
cggaaattcgcaagatgtattggactattgtttcaggtaatggatgatatattagacgtc
accaaagattcggtgttagacaagatgacatatccaaaactgatgggaatggagaaatgc
cggcagtatgcggaggagttgttggcagaggctaagcagcagttagagggttttgaatca
tacaaggcagtggtgccgctagtagccatggcggagtatatagcttcccagcakaactga
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