Cynara cardunculus var. scolymus (artichoke): 112502141
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Entry
112502141 CDS
T05604
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112502141
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112502141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_12
TPR_16
TPR_11
TPR_10
ANAPC3
TPR_19
TPR_9
TPR_17
TPR_CcmH_CycH
ARM_TT21_C
Coatomer_E
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
112502141
NCBI-ProteinID:
XP_024961735
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MARVPSKHERDHHLDFEGFLNNLQDWELSLKDKDKKLKSQSDMGKMEPSMLNAVSNSSNL
GVNGRSHESKEPGSGNSKKIGAVGVDKRQMVKTSSVNHSSTAREEDYLKKYDAVSRLSSG
FMRDDSSVDANSEKELGNEFFKQRKYKEAIDCYSRSLALSPTAVAYANRAMAYLKLKRFQ
EAEDDCTEALNLDDRYIKAYSRRSTARKELGKLKDSKEDADFALRLEPQNQEIKRQYADA
KSLYDNELLKKASASLKGPTQQVQKEVKLDNVPRSMPKISETTRVAAPKTESMEPFISSQ
KNHNIAKKELKESVQQLAARAASLATAEAAKNIVPPTSAYQFEVSWRGFSGDRTLQTRLL
KATNPVALPEIFKNALSAPLLIDVIRCIATFFSDDIDLAVKYLENLPKVSRFNMIIMCLP
PADKSDLQRIWDEVFCNKEVAADYVEILQQLCPKYCIIKQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctagggttccgagcaagcatgagcgcgatcatcacctggatttcgagggatttttg
aataacttgcaggattgggaactttcactcaaggataaagacaagaagctgaaatcacaa
tcagacatggggaagatggaaccttcaatgctgaatgctgttagtaattcgtccaacctt
ggagttaatggaagatcacatgaatcaaaagagcctggaagcggaaattcaaagaagatt
ggagcagttggtgtggataaaagacaaatggttaaaacttcatctgtaaatcactctagt
actgccagagaagaggattacctgaaaaaatatgatgcagttagccgtttatccagtggc
ttcatgagagatgacagttctgtagatgctaattcagagaaagagttgggtaacgagttc
ttcaagcagagaaaatataaagaagcaattgactgctattccaggagtcttgcactatcg
ccaactgcagtagcttatgcaaacagggcaatggcttatcttaaacttaagagattccag
gaagccgaggacgattgtacagaagccttaaacttagatgatcgttacattaaagcgtac
tcaagacgttcaacggctagaaaagaactcggtaaacttaaagattccaaggaagatgca
gactttgctttgaggttggagccacagaaccaagaaattaaaaggcagtatgcagatgca
aaatctttgtatgacaatgaacttcttaagaaggcatctgcgtcgctaaaaggaccaaca
caacaggtgcaaaaggaagtgaagctggataatgttccacgatctatgccaaaaatttct
gaaacaacgagagttgctgcacctaaaacagagagcatggagccttttatatcttctcag
aaaaatcacaatattgccaagaaagagttaaaagaatcagtccaacagcttgctgctcga
gcagcttctcttgccactgctgaagctgcaaaaaacattgtccctccaacttcggcttat
cagttcgaggtttcatggcgaggattctctggtgatcgtactctacagactcgtctgtta
aaggccacaaatcctgttgcattaccagagatattcaaaaatgccttgtctgcacctctc
ttaattgatgttattaggtgcattgccacctttttcagtgacgatattgacctggctgtc
aaatacttagaaaatctgcccaaggtgtcgagattcaatatgatcatcatgtgtcttcca
cccgcagacaaatctgatctgcaaagaatttgggatgaagtcttttgtaacaaggaagtt
gcagcagattatgttgagattcttcaacagctgtgcccaaaatactgcattattaagcaa
tag
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