Cynara cardunculus var. scolymus (artichoke): 112502159
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Entry
112502159 CDS
T05604
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112502159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112502159
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112502159
Membrane trafficking [BR:
ccav04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112502159
Atg1 complex
112502159
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112502159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112502159
NCBI-ProteinID:
XP_024961758
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MDLQSNNPNDHGRNEQIVSQFLLKSLHIVLDSRIPSIRPSGGRRGNLSLGSQVKKSDKWF
NLALGERPTALDSLNFWHRNLMEPMIIDIILVQEMPATAALGRNECTTSGYGLLVETLVE
RWVVQYESARTSHQLTESSVPYKKTYKKSIILLRSLYTMMRLLPAYRAYRKLSISTKACD
FDINYKVSSFSAPFTRTEEQAMKQYSFFPVEAQNGRLSISVKYRESLADFNLETSTSFPP
EIITDYVGSPATDPFRAFPMMDKGVHATSFPAREMQSPTSAPPQRPHSWTSGLSRGAPFT
HNQSFGSPPAHRSSTGRYDISSSPTDVYGQRTQNYRPPTHHRGTSFDDYQLSPPFSPSPS
PSPPTYISGGNYMQSRLRSETAPVSIPNPMIIRSPRYLSPNLSDPNRHSLPPPSPRSTRY
ELSSHESPSGIRSLKKSEMSKVGDLSSGSGSANQYSSHKVSRDNKDDSGRFSGLLSSSGS
PRIGFSRSSSRLSLQDELDDIDFSCPFIVDDVDTCESPVSRSVGGKQGRELSSHAKKSQD
AAVGALVRMLRTAPPLRQDSSCYSLSDGLEGEFNTASGFFIARKTSDALEELKAYRDMKD
LILSKSGTRLVSKQEL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcaatctaataatcctaatgaccatggaagaaacgaacaaatagtctctcag
tttctgttgaaaagtttgcatattgtgttggattctaggattccttccattcggcctagt
ggtggtcgtagaggcaacttatccttgggaagtcaggtgaaaaagagtgataaatggttc
aatctagcattaggtgagcgtcccactgctttagacagtctcaacttttggcacaggaat
ttaatggaacccatgataattgacattatactagttcaagagatgcctgctactgctgct
ttgggccgaaatgaatgtacaacatctggatatgggttattggttgagacacttgttgag
aggtgggttgttcaatacgagtctgcaaggacatctcatcaactcactgaatcttctgtg
ccttataagaagacatataagaagtctattattctcttacggtctctatataccatgatg
aggctccttccagcatacagggcttaccgaaagctatctatatcaaccaaggcttgtgat
tttgatataaattacaaggtgtcttcttttagtgccccgtttacaaggacggaggaacaa
gcaatgaaacagtatagtttctttcctgttgaagcccagaatggacgcctttccatatct
gtgaaatatcgtgaaagtctggctgattttaacttagaaacttcaacatcatttccacct
gagatcattacagattatgttggcagccctgccactgatccatttagggctttccccatg
atggataaaggtgtgcatgctacatcttttcctgccagagaaatgcaatcacctacttca
gcaccacctcaacgcccacatagctggactagtggcctaagcaggggagctccatttacg
cataatcaatcctttggttctccacctgcacatcgctcgtccactgggcgttatgatata
tcttcttcgcctacagatgtttatggtcaaaggactcaaaattatagaccaccaactcac
catagagggaccagcttcgatgattatcaactgtcaccaccattctctccatctccttca
ccatctccaccaacatacatttccggtgggaattacatgcaatctcggctacgctcagag
actgcccccgtgagtatccctaatcccatgatcatcagaagtcccagatacctttctcct
aatttatctgaccctaatcgacattctcttccgcccccatcacctagaagcacacgctat
gagttgtcatctcatgagtctccctcaggaatcaggtcccttaaaaagtcagagatgtca
aaggttggggacttgagttctggttccgggtcagcaaatcaatattctagtcacaaggta
tcaagggataacaaagatgattcagggaggttttcaggtttactatcatcaagtggttca
cctcgtattggattctctagaagctccagtagattgtctctccaggatgagttagatgac
attgacttctcatgtccatttatcgtggatgatgttgatacttgtgagtcccctgtcagt
cggagtgttggtgggaaacaaggaagggagttgtcttcacatgctaaaaagtcacaagat
gctgcagtgggggcacttgttcgtatgctgagaacagcaccaccccttcgacaagattct
agttgttattcgttgagcgatggtcttgagggggaattcaacactgcttctggatttttt
atcgcccgaaagacttcagatgctttggaggagctcaaggcttacagagacatgaaagac
cttattctctcgaaaagtggaactcggttggttagcaaacaagagctgtag
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