Cynara cardunculus var. scolymus (artichoke): 112502232
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Entry
112502232 CDS
T05604
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112502232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112502232
Membrane trafficking [BR:
ccav04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
112502232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
112502232
NCBI-ProteinID:
XP_024961856
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MKITALLVLKCNPDGSSDPVILANATDVSHFGYFQRSSVKEFIVFVGRTVAKRTPPSQRQ
SVQHEEYKVHSYNRNGLCALGFMDDDYPVRSVFSLLNQVLDEYQKNFGDSWKAVQTDCSQ
AWPYLDEALTRFQDPAQADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLS
TASQMFYKQAKKTNQCCTIL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcgttgcttgttcttaaatgcaatcccgatggatcgtcggatccggtg
atcctagcaaatgccacggacgtcagccatttcggttacttccagaggtctagcgtcaag
gaattcatagtctttgttggtcgtacagtcgctaaacgtacgcctccatcgcaacgtcaa
tccgttcaacacgaagaatacaaggtgcattcctacaatagaaatggtctttgtgctttg
ggctttatggatgatgactatcccgttcgaagtgtgttttcacttctaaaccaagtatta
gacgagtaccaaaagaattttggtgattcttggaaagctgttcaaacagattgcagtcag
gcatggccatatttagatgaagctttgaccagatttcaggatcctgcccaggcagacaag
ctgctgaaaattcagagggagttggacgaaacaaaaattatacttcacaagactatcgat
agcgtacttgaaagaggtgaaaagctggacagtttagtcgagaaaagttcagacctcagt
acagcttcacagatgttctacaaacaggcaaagaaaacaaaccaatgctgtacaatactg
taa
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