Cynara cardunculus var. scolymus (artichoke): 112502412
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Entry
112502412 CDS
T05604
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00061
Fatty acid biosynthesis
ccav00071
Fatty acid degradation
ccav01100
Metabolic pathways
ccav01212
Fatty acid metabolism
ccav04146
Peroxisome
Module
ccav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112502412
00071 Fatty acid degradation
112502412
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112502412
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ccav01004
]
112502412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112502412
Enzymes [BR:
ccav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112502412
Lipid biosynthesis proteins [BR:
ccav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112502412
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of breast milk
112502412
Exosomal proteins of breast cancer cells
112502412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
112502412
NCBI-ProteinID:
XP_024962067
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSAYIVGFLAPLLLTLALRNSKKRKTRGLPANVGGEPGYAIRNYRFTTPIETAWVGIKTL
AELFEQACKQHGEKKLLGTRKLISRDTEVHQDGKSFEKLHLGDYEWMCYSQVFQVVCNFA
SGLVQVGHKTGERVAIFADTREEWFIALQACFRRNATVVTMYASLGEEAICHSLNETEVT
TVICGNKELKKLLDISEQIDTVERVICMDDEILFNRTKGSNSWKIFLYSEVEGIGRESLV
DADPPLPADVAVIMYTSGSTGLPKGVIMTHSNVLATVSAVMTIVPGLGSKDVYLAYLPLA
HILELAAENIIAAVGGSIGYGSPLTLTDTSSKIKRGTKGDASILRPTLMAAVPAILDRVR
DGVWKKVDSAGGLSKKLFDLAYGRRLSAINGSWFGAWGLEKLLWSFLVFRKVRAILGGRI
RFILSGGAPLSSDTQRFINICLGAPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPLPCSY
IKLIDWPEGGYLTSDSPMPRGEIVIGGPNVTLGYFKNDERTQEVYKVDERGLRWFNTGDV
GRFHKDGCLEIIDRKKDIVKLQHGEYVSPGKVEAVLSVSPYVDNIMLHANSFHSYCVALV
VASQSAVESWASHKGIKFDDFTSLCQMEETVKEVYGSLIKAAKTARLEKFEIPAKIKLVS
EAWTPESGLVTAALKLKREVIRKTFSEDLANFYSP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtatattgtcggtttcttggcgcctcttctactcactcttgcacttcgaaac
tctaaaaaaaggaaaacccgaggtctacctgcgaatgtcggtggggaacctgggtatgcg
atcagaaactatcgatttacaactccaattgaaacagcgtgggtagggatcaaaactctt
gcagaactttttgagcaggcatgcaagcaacatggtgagaagaagctacttggaacacga
aaattaatttctagagataccgaagtacatcaagacgggaagtcttttgaaaagcttcat
ttaggtgattacgagtggatgtgctatagtcaggtgtttcaagttgtgtgtaattttgca
tccggtttggtgcaagttgggcataaaactggagaacgcgtagcaatctttgcggataca
cgggaagaatggttcattgctctacaggcttgtttcaggcgcaatgccacagttgtgacc
atgtatgcatctctgggagaagaagccatttgccactcattaaatgagacagaggtcact
actgtaatttgtggaaacaaagagctgaagaagcttctagatataagtgaacaaatagac
acggtagaacgtgtaatatgcatggatgatgagatattgttcaatcggacaaagggaagc
aacagttggaaaatctttttgtattctgaagtagaaggaattggcagagagagtctcgtt
gatgcagatccacctctcccagctgacgtcgcggtgattatgtatacaagcgggagtact
ggtttgcctaagggtgtaattatgacacacagcaatgttttagctacagtttctgctgtc
atgaccattgtgcctggccttggtagcaaggatgtttatttagcatacctaccactggca
catattctcgaacttgcagccgagaatattatcgcagctgtaggaggctcgataggttat
ggatcccctttaactcttacagatacctcgagcaaaattaagaggggcacaaaaggggat
gcatctattttaaggccaacactaatggcagctgttccagctattcttgatcgtgtccga
gatggtgtgtggaagaaggtggattcagcaggtggcttatcaaagaaattgtttgattta
gcctatggtcgccggttgtctgcaataaatggcagttggtttggggcatgggggttagaa
aagcttttatggagctttctagtgtttagaaaggtccgagccattttggggggtcgtatc
cgtttcattctgtctggaggtgcccctttgtcttctgatactcaaagatttatcaacatt
tgtcttggtgctccaataggtcaaggttatggtcttactgagacctgtgctggtgggaca
ttttctgagtatgatgatacatctgttggtcgtgttggtgcaccccttccttgctcctat
atcaagttaatagattggcctgagggtggttacttgaccagtgattcacctatgcctcgt
ggagaaatagtgattggtgggccaaatgttactcttggatacttcaaaaatgatgagagg
acacaggaagtatacaaagttgatgagagaggcttgaggtggttcaacacaggtgatgtt
gggcggttccataaagatggctgccttgagataattgatcgtaagaaggatattgtcaag
cttcaacatggagaatatgtttctccagggaaggtggaggcggttctcagtgttagccct
tatgttgataacatcatgttgcatgccaattcattccatagttactgtgtggcactcgtg
gtggcttcacagtctgcagtggagagttgggcttcgcataaaggtatcaagtttgatgac
ttcacaagtttgtgtcaaatggaagaaacggtgaaggaagtttatggttccctgataaag
gctgctaaaacagcacgattggagaagtttgagatccctgcaaagatcaaattggtttca
gaagcgtggactcctgaatctggactggttactgcagcactaaagctcaagagggaggtt
atcagaaagacattctcggaggaccttgcaaatttctactcaccatga
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