Cynara cardunculus var. scolymus (artichoke): 112502643
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Entry
112502643 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112502643
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112502643
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112502643
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112502643
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112502643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
112502643
NCBI-ProteinID:
XP_024962380
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MLVRGDLGFSSLVFLVVVVVVLPVIVFIVRRKWRHLVARREEVKWLLASASEESARVEFE
FEARETYFYTANGTPSARASVSPSASAPLGSPLKPQYKCAVCFCPTTTRCAKCKAVRYCS
GNCQIIHWRQGHKYECRPYVSVTPISDVGGSSYRQGDCKDRSDDFGTEVKQTAIPAERFP
ENSHHKDDVGVESLAHRQGTNSTSESNPPLSYEGHSLFSPPTKVSAGVTFENSETVKPAF
RTLVSSARKSTVLGKNNKKISTLSDEDAQLGTSSSSFWTDDGSNQSSLSEPSTNSSVGTI
HKRKSNIDEHDDCAPGSSCEAANRYMASHRTKGGYNSNIMNGFSASKVIDGSGLTGLGSR
KSNDDSNSSKDKVNDGSKSRRSMTWDAGVGSDLPPSKFSESSHPPSGASSHRASAGYSTL
KDDKTVGGLPSSGPERSNDLFSNKNVTSHTSKSRELGSSSSRASDTYLTFTSRHASYSIK
PVKVNNDKHRVTTCSSQLTENYPSVRSASNTSKLKVVDQVKPSKLSSQGSLEGGSETTHR
YSFKGLFPYEMFVKLYNWKKFELQPFGLKNCGNSCYANAVLQCLIYTPPLTAYLLEGIHS
KACDKRGWCLTCEFEGLVMKAKNRNSPLSPIRILTHIENIGSNLGHGREEDAHEFLRYVI
DALQSVCIKEAGKNALNSLEEETTIIGLTFGGYLRSKISCMKCGGKSERHERMMDLTVEI
EGNIRTLEEALDKFTCTEILDGENKYKCSRCKSYEKAKKKLTLLEAPNVLTIALKRFESG
KFGKLNKSIRFPDILDMAPYVSGTSDKSPIYRLYGLVVHIDMMNAAVSGHYVCYVKNVQN
RWFKFDDSMVKEVDLQHVLTKGAYMLLYVRCSPRAPRSIRNSLIHDHHDPRKHRTPPSSA
ARSLSTEPWDIHTYHPTSEPPVHHRSLEEESSSSDNSGFFSESCSCSTETSGIEDHISGD
DYSRNMNLNSSDSDTSSTSSFPSPLYSRLSQLYASRTNGKECRNLDCSYNSGRVTNKLDR
LGGQAINPNSKPKSTTRGKSN
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttagaggggatctagggttttcctccctggtgttccttgtggttgtagttgta
gttttgccggtgatcgtgttcattgtccgtcggaaatggcggcatttggtggcgaggagg
gaggaggttaaatggctactggcttcggcttccgaggagtcagctagggttgagtttgag
tttgaggctagagaaacgtacttttacactgccaatggtacaccctctgccagggcttcg
gtttcaccttccgcttcagctccgttgggttcaccgctaaaaccgcaatacaagtgtgct
gtttgcttttgtcccaccaccacgcgttgtgccaagtgcaaagccgttcgttactgttct
ggcaattgtcaaattattcattggagacaaggtcacaaatatgagtgccgtccttatgtt
tctgtgactccaatcagcgatgtgggaggcagctcttacaggcaaggggattgtaaagat
cggagtgatgactttggtaccgaagtgaagcaaactgctataccagctgagagattccca
gaaaattcacatcacaaggatgatgttggagttgaatcccttgctcatcggcagggtaca
aattctacatctgaatcaaatccccccttgtcatatgagggacattctcttttctctccc
cctacaaaagtttctgcgggcgttacctttgagaacagtgagacggtgaaaccagcattc
cggactttggtcagctctgcaagaaaatcaactgtcttagggaagaacaataagaaaata
tctacccttagtgatgaagatgctcagctcgggacttcaagttcatccttttggactgat
gatggctctaatcagtcttcactttctgagccttctacgaactcttctgttgggactatt
cataagagaaagtccaatatcgatgagcatgatgattgtgcaccaggcagttcttgtgag
gctgcaaatcgttacatggctagccacaggacaaaaggtggttataatagtaatattatg
aatggatttagtgcctccaaagtcatagatggatctggtctaactgggttgggaagtagg
aagtctaatgatgatagcaattcatcaaaggacaaggtcaatgatggttccaagtccagg
agatcaatgacctgggatgccggtgttggcagtgatttgccaccatcgaagttcagcgaa
tcaagtcatcctccgtctggtgcttcttctcatcgtgcttctgcagggtattcaacactt
aaagatgataaaaccgttggtggcttgccttcttctggccccgagaggtcaaatgatctt
ttcagtaacaagaacgtgacttcccacacatctaaatctagggaactaggttcatcatca
tccagagcgtctgatacttatttaacatttaccagtagacatgcatcttatagtataaag
cctgtgaaggtcaacaatgacaagcatagggtcactacttgttcatcccagttgacagaa
aattatccaagtgttagaagtgcatcaaatacatcaaaattaaaagttgttgatcaggtc
aagccctcaaagttgtctagtcaggggtcattggagggaggaagtgagacaactcacaga
tacagtttcaagggtctcttcccatatgaaatgtttgtcaagctgtacaattggaaaaag
tttgaactgcagccttttggactaaaaaattgtggaaacagctgttatgctaatgctgtt
ctccagtgcttaatatataccccgcctctgactgcttatcttctcgaagggattcattcc
aaagcatgtgataagagaggatggtgcttgacatgtgagtttgaaggccttgttatgaag
gcaaagaaccggaactctccactgtctcctattcgcatacttacccatattgaaaacatc
ggaagcaatcttggccatgggagagaagaagatgcacatgaatttctaaggtatgttatt
gatgctttgcaatcagtttgcatcaaggaagctggaaaaaatgctctaaactctttagaa
gaagaaacaactatcattggacttacctttgggggttatttgcggtcaaagataagctgc
atgaagtgtggcggcaaatctgagcggcatgagaggatgatggatctcactgttgaaata
gaaggcaatatacgaacattagaagaggctttggataaatttacatgtactgagattctg
gatggtgaaaacaagtacaaatgcagcaggtgcaaatcctatgagaaagccaaaaagaaa
ttgacattgttggaggctccgaatgtgcttactattgcattgaaacggtttgagtctggt
aaatttggaaagcttaacaaatcaattcgcttcccagatattctagacatggctccctat
gtcagtgggacaagtgataagtctccaatttacagactttacggactggtggttcatata
gatatgatgaatgctgcggtctctggtcattatgtttgctacgttaagaatgttcagaat
cgatggttcaagtttgatgacagcatggtaaaagaggtagatcttcaacacgtgttgaca
aaaggagcctacatgcttctatatgtgaggtgctccccacgtgccccacgatcaatccgc
aactcgttaatccacgaccaccatgatccgaggaaacacagaacgccaccatcatctgca
gcgagatctctctccaccgaaccttgggacattcacacttatcacccaacttccgaacca
ccggtccaccaccggagtctggaggaggaatcctcctccagcgacaactctggattcttc
tcggaatcctgttcttgcagcacagagaccagcggcatcgaagaccatatttctggtgac
gattactcaagaaacatgaacttgaattcatcagattccgacacctcatcaacctcttcc
ttcccgtccccgttgtactccaggctttctcagttgtacgcttcgagaacaaatggtaag
gaatgtagaaacttagattgtagttataatagtggtagggtaaccaacaagttggataga
ttaggagggcaggctattaacccaaactcgaaaccaaaatcaacgactcgaggaaaatcc
aactga
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