Cynara cardunculus var. scolymus (artichoke): 112502782
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Entry
112502782 CDS
T05604
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112502782
Transcription machinery [BR:
ccav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
112502782
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Gon7
Motif
Other DBs
NCBI-GeneID:
112502782
NCBI-ProteinID:
XP_024962559
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Position
LG 1:complement(266270..270118)
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AA seq
518 aa
AA seq
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MGVVTVSSSAARTPFGLSARFSTHSSPTKRTTILAFKTDKTKNTALVSSKESANLSVNTS
KENPKRIRRNKKPSERVQALSTAEAPSCSLDLDYNEAAAELDRIYKLSPTTIESDTEDHD
DQVIKRGRRGRRKISDANEKPESRTAVDIVRGQHKRLQRLSLEKRIQLKNKKDVAVITSK
QKRKHGKINEDEKVNRLVRDYSASTDLGSLDWKKMKIPPVLPSSEHTRLFISLQTMKAIL
AVKEDLQTVLAREPTDGEVADATNMNVSQLRKQIGVGQAARNKLIKHNLRLVLFVMNKYF
QEFANGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHTIIRSMTLSSFIKVP
FGLESVRIEIQKAKKKLWFDLMRPPTEEEIAKKAGISLQRYREVTRSSRPVLSLNRRHAV
TQEEFINTIADTNAAGDDERRQPALLRLALDDVLDSLKPKESLVMRQRYGLDGKGNRTLG
EIAGNLNISREMVRKHEVKALMKLKHPARVEYLRHYIL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtatctagctctgctgcaaggaccccatttggattaagtgcaaga
ttttcaactcattcatctccaactaagagaacaacaatattagcattcaaaacagataaa
accaagaacactgctttggtttcatccaaagaatctgcaaatttatctgtcaatacatct
aaagaaaacccaaagagaattagacggaataagaagccttcagaaagagtacaagcttta
tctactgctgaagctccttcatgctcattagatttggattacaatgaggctgcagctgaa
ctggataggatatacaagctcagtccgacaactattgaatctgataccgaggaccatgat
gatcaggtgatcaaaaggggtcggcgagggaggaggaagatttctgatgctaatgagaag
cctgaaagcagaactgcagttgatattgtgaggggtcaacataaaaggttgcaaaggttg
agccttgaaaagaggattcaactgaagaataagaaagatgttgcggttattacttcaaag
cagaagaggaagcatggcaagatcaatgaagacgaaaaagttaacagactggttagggac
tactccgcttctacggatttaggtagcttagattggaagaaaatgaagatcccgccagtt
cttccttcttcagagcatactcggctctttatctcgttacaaactatgaaggcaattctt
gcagtgaaagaggatttacagactgttttggctagagaaccaacagatggagaggtagca
gatgcaacaaacatgaatgtatcacaattgaggaaacaaattggagttggccaagcagcc
agaaacaaattgattaagcataatcttcgactcgtattgtttgtcatgaacaaatatttt
caagagtttgcaaatggccgaaattttcaagacttctgccaggcaggagtgaagggtctg
atcacagccattgatcggtttgaaccaggaagaaaactacaactctcaacatacgctcta
ttttggatccgacataccatcatacgctccatgaccctctcaagtttcattaaagtcccc
tttggccttgaatcagttagaatagaaatacagaaggccaaaaagaagctatggttcgac
cttatgagaccgccaacggaagaagagatagcaaagaaagctgggatttcccttcagaga
taccgtgaagtgacaagatcatcgagacccgttctttctctcaacagaagacatgcagtc
acacaggaagagtttatcaacacgattgccgatactaatgcagctggtgacgatgagagg
cggcaacctgctcttctcagacttgcactagacgatgtgctggattccctgaagccgaag
gaaagtttggtgatgagacaaagatacgggcttgacggaaaaggcaacagaacattggga
gagattgcgggtaacttgaatatatcaagggaaatggtcagaaagcatgaagtgaaggct
ctaatgaagctcaaacatccggcacgagttgagtatctacgccactatatcttatga
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