Cynara cardunculus var. scolymus (artichoke): 112502794
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Entry
112502794 CDS
T05604
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112502794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112502794
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112502794
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
112502794
NCBI-ProteinID:
XP_024962573
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Position
LG 1:complement(273684..275487)
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AA seq
353 aa
AA seq
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MSGDRCTSLTDFFDSYAGQFEETNFLSPSTASTNDIFSILEVFEGGSDEFTSMMPLETGF
HAKDHKSTSSCSVLQDLVEAELEMLSPKTKRQKLSSVDQGGANSDGQQKVSHITVERNRR
KQMNEHLTVLRALMPCFYVKRGDQASIIGGVVDYIAELQQVLQSLEAKKQRKVYSDVLSP
RLVSSSPRPSPLSPRKPPISPRPLLPISPRTPQPVSPYKPRFQQPATTNSSYIPPIPSPM
AANLTPPSLEPSPSSSSSTSDIVNELVANSKSAIADVEVKFSGPNLLLKTISPRLPGQAT
KIVSVLEDLSLEILQASINTADETMVQSFTIKIGIECQLSAEDLVEHIQQTFS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgatcggtgtacttctttgacggatttcttcgatagttatgccgggcagttt
gaagagaccaatttcttgtcaccctctacagcatctaccaacgacatcttcagtattctt
gaagtttttgagggtggttccgatgaattcacatctatgatgcctttggaaactgggttt
catgcaaaagatcataagtccacttcttcctgcagtgttttacaagatctcgtagaggcg
gagctggagatgctttcgcccaagaccaagagacaaaaactgtcttcggtcgaccaaggc
ggtgcaaactcagacgggcagcaaaaagtgtcgcatatcacggtggagaggaaccgaagg
aagcagatgaacgagcatctaaccgttcttcgtgcactaatgccttgcttctatgtcaaa
aggggtgatcaagcatcaataataggcggagtagttgattacatcgctgaattgcaacaa
gttcttcaatcattagaggcaaagaagcaaagaaaagtttacagtgatgttttaagtcca
aggcttgtttcttcaagccctagaccttcacctctcagccctcggaaaccgccaattagc
cctcggcccctcttgcccattagcccaagaaccccacaaccagtaagcccttacaaacct
aggttccagcaacctgcaactaccaattcctcttacatacctccaataccatcaccaatg
gcagcgaatttaacaccaccttcacttgaaccttcaccttctagttcttcctcaacttca
gacattgttaacgaactcgttgcgaattcaaagtcagccattgctgatgttgaggtgaag
ttctcaggccctaatcttcttctgaaaactatctcgcctcggttgcctggtcaagcaacg
aaaatagtttcggttcttgaagacctttctcttgaaatcctccaggcgagcattaacaca
gctgatgaaactatggtgcaatccttcaccatcaagattggaatcgaatgccagctaagt
gcggaggacctggttgaacacattcagcaaacattcagctag
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