KEGG   Cynara cardunculus var. scolymus (artichoke): 112502939
Entry
112502939         CDS       T05604                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013  Nucleocytoplasmic transport
ccav03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112502939
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112502939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112502939
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    112502939
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th IBN_N TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 112502939
NCBI-ProteinID: XP_024962730
LinkDB
Position
Unknown
AA seq 1008 aa
MELQIQVAQAVHVLNHDAQSCNRVSANQWLVQFQQTDAAWEIATSILTSAHPTPYVSDFE
VEFFAAQVLKRKIQNEGHCLQLEAKESLVNALLLAAKRFSLGPPQLLTQICLALSTLVLH
AVEYYKPIEKLFYSLQNLQGQDDGNIAVLEMLTVLPEVVEDECATYKTKSGQRSDYGPEL
LSHTSAVLEFLLQQSEESFDGVVQLHERSRKILRCLLSWVRAGCFSEILPVSLLAHPLLN
FVFNSVQVLSSFDLAIEVLIELVGRHEGLPQVLICKVGFLKDVLLRAFSGGDEKVISGLA
CLMSEIGQADPSLIMEAHSEALVLVDALLSCVSFPSQDWEIADSTLQFWCSLASNIVRMD
AAITENKKHVQDVFSPVFSALLDALLMRSQVDDSTYTVETATRDLPDGLAQFRQNLVELL
VDICQLLKSAVFLQKIFFGGWLSSNIQIPWKEVETRMSALNVVADVVLHEGQTFDLSMVL
HLVTILCDRASYEPKGFMCIVHRSLADVIGSYSKWMSSYITNARPLLLFFAAGMSEPLCS
HACATAFRKFCEDATAVMHKPSSLEMLMWIGEGLEKRHLPLEDEEDVIGAVTLILGYLPS
AELRNNLLLKLLSSSFESIGKLIDRDHVHSLRQLPAAYTHLVNSAAKGFFRIGIVFSHLV
MPLSSCHDIDNSIIFVLGSFWPLLEKFFQSEHIENANLSMAACRALSQAIKSSGSIHFVT
LLPKLLDYLSANFASFQTHECYIKTASVVVEEFGNKEEYGPLFISTLERFTHASSVMALN
SSYVCDQEPDLVEAYCSFTTIFLRSSPKEVVASSGPLLEVSLQKAAICCTAMHRGAALGA
MSYMSCFLELGLNSLLESVTCNSESLITSMAVHVISHSGEGLVSNVVYALLGVSAMSRVH
KSATILQQLAAVCSFSEKTTWKSILCWDSLHGWLHSAVRSLPGEYLRQGEAESLAPVWLK
ALADAAVDYVESRSSDGHMWGKGKGKGGRMLKSLFREFVDTHRNIGTS
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggagttacaaatccaggtggcgcaggcggttcacgtcttaaatcacgatgctcaatct
tgcaatcgtgtttctgctaatcagtggctggttcagttccagcagacagatgctgcttgg
gagatcgccacctcaatcctgacctctgcccatcctacaccgtacgtttctgacttcgaa
gttgagttttttgctgctcaagttcttaagcgtaagatccaaaatgaaggacattgtctg
cagctggaagcaaaggaatctcttgttaatgctctccttttggctgctaaaagatttagc
ttgggtccaccccagctcttaacacaaatttgtctggctctatcaactctcgtacttcat
gctgtggagtactacaagccaatcgagaagctcttttacagtcttcagaatctgcaaggt
caggatgatggcaatattgctgttctggaaatgctcacagtcttaccagaagttgttgaa
gacgagtgtgctacttataaaaccaagtcaggtcaaagaagtgactacggcccagagcta
ctctcacatacatcagcagttctagagttcctactgcagcaatccgaggaaagttttgat
ggtgtcgtacaactacatgaaaggagcagaaagatactgcgttgtttgttaagttgggtt
cgagcaggatgcttctcagaaattttaccagtctcattactagcccatccccttcttaat
tttgttttcaattctgtgcaggttttgtcctcatttgatctggcaattgaggttctgatc
gaactagttggtcgacatgagggactgccacaagttcttatatgcaaagtaggatttctt
aaagatgttcttcttcgagcgtttagtggtggagatgagaaagtaattagtggtcttgca
tgcttgatgtcggagattggccaggctgatccaagtttgattatggaagcccattctgaa
gcacttgtgctcgtggatgcacttttgagttgtgtatcatttccaagtcaagattgggag
attgcagactcaactttgcagttctggtgtagtcttgcgagcaatattgttcgaatggat
gctgcgataacagaaaataaaaaacatgttcaagatgttttttctccagttttttcagca
ttgcttgatgctcttctgatgcgttctcaggtggatgattcaacatataccgttgaaact
gcaacaagggacctaccggatggtcttgctcagtttaggcaaaatttggtggagcttttg
gtggacatttgccaacttttgaagtctgctgtgtttttgcaaaagattttttttggtggt
tggttgtcttcaaacatacaaattccttggaaggaggtggaaaccagaatgtctgctctt
aatgtggttgctgatgtagtactgcatgaaggccaaacatttgatctctccatggtcttg
cacttggtgacaatcttgtgtgatagggcatcatacgaaccgaaaggctttatgtgcatt
gtacacaggtcacttgcggatgttattggctcctactcaaagtggatgtcttcttacata
actaatgcgaggccattgcttttattttttgcagctggtatgtcagaacctttgtgttca
catgcttgtgcaactgccttcaggaagttctgtgaagatgctactgcagttatgcacaaa
ccttcaagtttagaaatgttaatgtggattggagagggattggagaagagacacttacct
ctggaagatgaagaagatgttattggtgctgttactctgatacttggttaccttcctagc
gcggagttgagaaacaatttgctgcttaagttgctttcttctagctttgaatcaattggc
aaacttattgacagggatcatgtccattctttgaggcaactaccagctgcttatactcat
cttgtcaactctgcagcgaagggttttttcaggataggaattgtcttcagtcatcttgta
atgccactttcttcatgtcatgatatcgacaattctataatttttgttcttgggagtttc
tggcctctgcttgagaaattctttcagtcagagcacattgaaaatgcaaacttatcaatg
gcggcatgccgggctctttcacaggcaatcaagtcctcaggtagcattcattttgtgaca
ctgttgcccaaacttttagattatctatcagcaaattttgcatcatttcaaactcatgag
tgctacattaaaacagcttctgttgtcgttgaagaatttggtaataaggaggaatatgga
cctctattcattagtacgcttgaaaggtttacacatgcatcatcagtaatggctctaaat
tcttcgtacgtatgtgatcaagagcctgatcttgtggaggcctattgtagtttcacaacg
atctttcttcgtagctctccgaaggaagtagtagcttcttctggtcctcttcttgaagtt
tcgcttcagaaagcagctatatgttgtacagcaatgcatcgtggagcagcgcttggagca
atgtcatatatgtcttgtttcctcgagcttggcctgaattcgttgctggaatcagtcaca
tgtaactctgaatcattaattacatccatggcggttcatgtaatatctcacagtggcgag
ggacttgtatcgaatgtggtgtatgctttacttggtgtttcagcaatgtcaagggttcac
aagtctgcaacaatcttacaacagctggctgcagtatgcagttttagtgagaaaacaacg
tggaagtctattctctgttgggattctctacatggatggctacattctgcggtgcggagt
ctacctggtgagtacttaaggcagggagaagcagaaagtctagcaccggtatggctaaag
gctctagctgatgcagcagttgattatgttgagagcagaagcagtgatggacatatgtgg
ggaaagggaaaaggaaagggtggcaggatgctcaagtctttatttcgggaatttgttgat
actcatcgtaacattggaacatcatga

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