KEGG   Cynara cardunculus var. scolymus (artichoke): 112503064
Entry
112503064         CDS       T05604                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112503064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112503064
   03041 Spliceosome [BR:ccav03041]
    112503064
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112503064
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112503064
Spliceosome [BR:ccav03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112503064
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 Nup35_RRM_2 DUF3669
Other DBs
NCBI-GeneID: 112503064
NCBI-ProteinID: XP_024962898
LinkDB
Position
Unknown
AA seq 489 aa
MAKKRKSRASQPSVEEPVPMEEPQEQINEAQQEQEQEQEQEHTANDDVLGKELVQEGDEN
AQNLEENKEKYEQEEEDDAQEEDEEEESEEETTVNEVKVEANGGGGGEETEDLDEEPVEK
LLEPFSKEQLLLLLKEAVSKHPEFIESVQKIADADPAHRKIFVHGLGWDTNSEILTSEFG
KYGEIEDCKAVVDKVSGKSKGYAFILFKHRAGAQKALKEPQKKIGNRMTSCQLASAGPIP
APPPTAPPVSEYTQRKIFVSNVSAEIDPQKLLEFFSKFGEIDDGPLGLDKQTGKPRGFAL
FVYKSVESAKKALEEPHKNFEGHTLHCQKAVDGPKPNKPYFQQPHQHHNQHQHHNQHQHQ
QYGGHHHPSKKSKYSSSGGGAGQGHLMAPSGPSVGYNPAVPPALTPALGQALTALLATQG
AGLGNLLGLGGPVNPQGMPPAMNNPGYGNQAGASYGAQPGMQGGYPNPQVGQGGNRPQQG
GASYMGHGH
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggctaagaagcgaaagtcccgtgcttcacaaccttcggtagaagaaccagtacctatg
gaggagcctcaagaacagatcaatgaagcacaacaggaacaggaacaggagcaggaacag
gaacataccgccaacgatgatgtcttagggaaggagctagtgcaagaaggtgatgaaaac
gctcaaaatctggaggagaataaagaaaagtatgagcaagaggaggaggacgatgctcaa
gaagaagacgaagaagaagaaagcgaagaagaaaccaccgtaaacgaggtcaaggttgaa
gcgaacggcggcggcggaggagaagaaacagaggatttggatgaagaacccgtagagaag
cttcttgagccgttctccaaggaacagctcctcttactgctcaaggaggctgtttcgaag
caccctgaatttatcgaaagcgtccagaagattgccgatgcggaccctgctcacaggaaa
atatttgtgcatggtctaggttgggataccaactctgagatcctaactagcgagtttgga
aagtacggtgagattgaggattgcaaggctgtggtggacaaggtctctggaaaatctaaa
ggttatgcgtttatactatttaagcaccgggccggggctcagaaagctttgaaggaacct
cagaagaagattgggaaccgcatgacctcatgtcagctggcttctgctgggccaatccct
gctcctccaccgactgcacctccggtgtccgaatacacacaaaggaaaatattcgtgagc
aatgtgtctgcggagatcgatcctcagaagcttttggagttcttttcaaaatttggggag
atcgatgatgggccactgggattagataagcagactggaaagcctagagggtttgcgctc
tttgtgtataagagtgtggaaagtgcaaagaaagctctggaagagccgcacaagaatttt
gaagggcatactttgcattgccagaaggccgttgatggtccaaagccaaataaaccttac
tttcaacaaccacatcagcatcacaaccagcatcaacatcataaccagcatcagcatcaa
cagtatggtggtcatcatcacccttcaaaaaagagcaagtattccagctcaggaggtggt
gcaggacaaggtcatttgatggcaccttcgggaccttcggtgggttacaacccagccgtt
cctccggcattgacccctgctttgggacaggccttgactgcactccttgcgactcaggga
gcaggactggggaatcttttaggacttggtggacctgtgaacccacagggaatgccacct
gcgatgaacaatcctgggtatggaaatcaggcaggtgcaagctatggtgcgcaaccaggg
atgcagggtgggtaccccaacccacaggttggtcaaggaggcaatagaccgcagcaaggt
ggtgcatcttacatgggtcatggtcactag

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