KEGG   Cynara cardunculus var. scolymus (artichoke): 112503196
Entry
112503196         CDS       T05604                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03020  RNA polymerase
ccav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112503196
  09124 Replication and repair
   03420 Nucleotide excision repair
    112503196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccav03021]
    112503196
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112503196
Transcription machinery [BR:ccav03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112503196
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112503196
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Ogr_Delta Zn_ribbon_recom Zn_ribbon_RPAB4 Zn_ribbon_4
Other DBs
NCBI-GeneID: 112503196
NCBI-ProteinID: XP_024963039
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ
DVAADPTLPRTKAVRCAQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgtcgagaatgcaacaacattctctatcctaaagaagataag
gatcagaagatcctcctctatgcttgccgcaactgcgatcatcaggaggttgccgataac
aactgtgtctacagaaatgagatacaccatgctgttggggagcgaactcaagttttgcag
gatgttgctgcagatccaactcttccacgcacaaaagcagttcggtgtgctcaatgtggt
catggagaggctgttttcttccaggcaactgctagaggggaagaaggtatgacattgttt
ttcgtttgctgcaatccaaactgtggccatcggtggagggattga

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