Cynara cardunculus var. scolymus (artichoke): 112503364
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Entry
112503364 CDS
T05604
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03030
DNA replication
ccav03410
Base excision repair
ccav03420
Nucleotide excision repair
ccav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112503364
03410 Base excision repair
112503364
03420 Nucleotide excision repair
112503364
03430 Mismatch repair
112503364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112503364
03036 Chromosome and associated proteins [BR:
ccav03036
]
112503364
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112503364
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112503364
DNA Replication Termination Factors
ELG1-RFC complex
112503364
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112503364
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112503364
Check point factors
HRAD17(Rad24)-RFC complex
112503364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
AAA_lid_RFC1
RuvB_N
RCF1-5-like_lid
AAA_11
AAA_16
Mg_chelatase
AAA_14
AAA_5
AAA_2
AAA_assoc_2
nSTAND_NTPase5
SLFN-g3_helicase
ResIII
AAA_24
nSTAND3
PhoH
AAA_19
AAA_7
AAA_28
AAA_30
NPHP3_N
RNA_helicase
Parvo_NS1
AAA_25
DUF815
bpMoxR
HrpA_pilin
TIP49
NB-ARC
AAA_18
ATPase_2
AAA_17
BPS1
Motif
Other DBs
NCBI-GeneID:
112503364
NCBI-ProteinID:
XP_024963185
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQQGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFVCNYISRIIEPLASRCAKFRFKPLSEDIMST
RILHISKMEGLNLDSEALSTLSSISQGDLRRAITFLQGAARLFGSSISSKDLISVSGVIP
HEVVEALLAACKSGSFDSANKEINNAIAEGYPVSQMLSQLFDMVVESIDFSDEQKARICR
KLGESDKCLVDGADEYLQLLDACSSMMKAFCNMPEGFSNDI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctccattgttgcagagctctcaaccttgggtcgagaaataccgaccaaggcgagtg
aaggacgttgcccaccaagacgaggttgtccgagtccttaccaacacgcttgagaccact
aattgtccccacatgctgttttatggccctcctggaaccggcaaaactaccacagccctt
gccattgctcatcagctttacggtcctgaactatacaagtccagggttctcgagctcaat
gctagtgatgatcgtggaatcaacgttgttcgaactaaaattaagaattttgcagcagtt
gctgttggttctggtcagcaagggggttacccttgcccaccttataaaattatcatcctt
gatgaggcagattccatgaccgaagatgcacagaatgctttacgtcgtactatggaaacc
tactcaaaagtaacaagattctttttcgtatgcaattacatcagcaggattatagaacct
cttgcttctagatgtgccaagttcaggtttaagccactctctgaggatatcatgagcact
cgtatactacatatctccaaaatggaaggcctaaacctggactcagaggctctatcaacc
ttaagttccatatctcaaggagatcttcgtcgtgctataactttcttgcagggagctgct
cgcctatttggatcttcaatttcttccaaggacttgataagtgtttctggggtcatccca
catgaagttgttgaagctcttcttgcagcttgtaaaagtggttcattcgactctgcaaac
aaagaaatcaataatgctattgcagaggggtatccagtcagtcagatgctttctcagttg
tttgatatggtggttgaatctattgatttttctgatgaacaaaaagcaagaatatgcagg
aaactgggtgaatccgataagtgtcttgttgatggagcagatgagtatttacaactgctt
gatgcatgcagctctatgatgaaagcattttgtaacatgccagaaggattttccaatgac
atttaa
DBGET
integrated database retrieval system
