Cynara cardunculus var. scolymus (artichoke): 112503532
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Entry
112503532 CDS
T05604
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112503532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112503532
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
RNases
112503532
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
112503532
NCBI-ProteinID:
XP_024963317
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MSSPVYSGKGEEVGTNNDPNSAFFDVYGPQAKAGVEFKTPEANSTLNLEDIQGLVTWVLA
EGFMPSWVFIKNKPLIPKVAMLYVPGLDAAIYLSQSKVLHSLKECCGIPRAVLAPSCVSD
GMQIIDALLTCKLKRKREAGTVTNKCGPWSQPGICSIREDLSLAELMKDIPFPVSYYTLT
TKELEDNGYHHDQPGFFSTLPAPSGKPVHEMVAVDCEMCITNEGFELTRVTLVNFRGQVL
FDKLVKPSNAITDYNTRYSGITSEMLDGVTTTLRDVQEDFLQVVNRETILVGHSLENDLS
ALKISHSLVIDTAILYKHSRGGTYKIALRVLTRKFLSREIQYSGNGHDSIEDAKAAMDLA
LLKIKHGPDFGRPPSFMRKKFLTVLSDCGKATSFIDNISIVKRYASESSHSIPVTSDDEA
LSKAIKEVKNDKVHFVWAHFTELSSYYKKQAEDAEALNRKLAEMMALLTCNKKFKGRKSI
KYTVTPDLKDVLNRLNIRIKNIYSNLPTNAMLIVCSGHGDTAIVQRLRKMLAEKVDTNIP
RDHLVKVLEELQAQAEVGLCFVGVKH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccggtatacagtggcaaaggagaagaagttggcaccaacaacgatccaaac
agtgcattttttgatgtctatggcccacaggcgaaagcaggtgtggagtttaagacccca
gaagcgaattcaactctgaacttggaagatattcaggggcttgtcacttgggtgcttgct
gagggattcatgccatcatgggttttcattaagaacaagcccctgattccaaaagtggcc
atgctttatgttccaggccttgatgcagcaatctatctgtctcaatctaaagtactacac
agtttaaaagaatgttgtgggatcccaagggcagttctagcacctagctgtgtatcagat
ggaatgcagataatagatgcacttcttacatgcaaacttaaaaggaaaagggaagctggt
acagttactaataaatgtggaccttggtctcaaccaggtatatgttctattcgcgaagat
ttgtccttagctgagctcatgaaagacattccatttcccgtatcgtactatacacttaca
acaaaggaattagaagataatggataccaccatgatcaaccaggtttcttttcaactctt
cctgctccatcaggaaagcctgtgcatgaaatggtggccgttgattgtgaaatgtgtatc
accaatgaggggttcgagctcacaagagtaacactagtaaattttagaggacaggttcta
tttgataaattggtgaaaccatcaaatgcgataactgattacaacactaggtatagtgga
ataacaagtgagatgttggatggagtcaccacaactctaagagacgttcaggaagatttt
ttacaagtggtcaatagagaaacaattttggttggacattcattggagaacgatttatca
gctttgaagatctcccatagtttggtgatcgacactgccattttatataagcattcacgt
ggcggaacatacaaaattgctcttcgtgtgctcactaggaaattcctctccagggagata
caatattccgggaacggccatgatagtatcgaggatgcaaaagctgcaatggatttagcg
ttgttaaagatcaaacatggacctgattttggccgacctccatcatttatgcggaaaaaa
ttccttacagttttaagcgactgtggcaaggccacatcttttattgataatatatcgata
gtgaagagatatgcttcggaatcatcacattccattccagtgacttctgatgatgaagct
ctatcaaaagccatcaaagaggttaaaaacgacaaagtacactttgtctgggcacatttt
acggaactgagttcttattacaagaagcaagcagaggatgctgaagcattgaatagaaaa
cttgctgagatgatggcgttgcttacttgcaataagaagttcaagggtagaaaaagcatc
aagtacaccgtcactcctgatttgaaggacgttcttaatcgcttaaatatcagaataaaa
aatatttactccaatttacctaccaatgccatgctaatagtttgctctggtcatggagac
actgcaatcgttcaaagattgaggaaaatgcttgcagaaaaggtcgacacaaacatacct
cgggatcatcttgtaaaggtcctggaagagctgcaggcacaagccgaagtaggtttgtgt
tttgttggtgtcaaacattga
DBGET
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