Cynara cardunculus var. scolymus (artichoke): 112503752
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Entry
112503752 CDS
T05604
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112503752
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112503752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
DUF7128
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112503752
NCBI-ProteinID:
XP_024963514
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MAAASSSTSFFGGRSEEEQHVSSVPTSSSTIQSAAAQQKKKRSLPGTPNPDAEVIALSPK
TLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVKRKVYLCPEPSCVHHD
PSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFS
RRDSFITHRAFCDALAQESARHPSALGTIGSHLFGGHLSNSMNLGLSQVGSQISQLHDQN
HQSSTTNLLSLGSANFEQVMLPPSQTTLFSQTQQQQMPNSSSPFFISNSNQGLNHVFDYE
QQRQQHGLMANKPNIHGLMQLPDLHSNTTKISPNLFNLGFFSGSSNPTNGLKNSENNSQN
NDTNMSSTGFMIPDHQFNNGGGSHDRVFLNSNNPHQENQMPPHMSATALLQKAAQMGSTT
SNNNATTLLKSFGSSSKSGVGGGDGKSHTGRQTLSSNFDARGDQALQSEMESDNQLQGLM
NSLSSGGASSMFGGYGGNQNRNMNFGNMNEAGKFNPQNFSLSVGNSNRTTLDFLGVGYSQ
VEQQQQRPAHINVGSLDPEMDSSTQATHMRGGSSKLQGN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcctcttcatcgacgtcgtttttcggaggaagatcagaagaagaacaacat
gtttcttctgtgcctacatcttcttcaaccattcaatcagctgcagcccaacagaagaag
aagagaagccttccaggaactccaaatccagatgcggaggtgatagcgttgtcaccaaag
actctaatggcaacaaaccggttcatatgtgaagtttgcaacaaaggcttccaaagggaa
caaaacttgcaactccacagaagaggacacaacctgccatggaagctcaagcaaaagagt
aacaaagaagtgaagaggaaggtttatctgtgcccggagccttcatgtgtccaccacgac
ccttctcgtgcattaggagacctcactggaatcaagaaacactattctagaaagcacggt
gagaagaaatacaagtgcgagaagtgttccaagaaatatgcagtccaatccgactggaaa
gctcactcgaaaacctgtggtacccgtgaataccgatgcgactgtggcaccctcttctca
aggcgggacagttttatcacacaccgcgctttttgtgatgcactcgctcaagagagtgca
aggcatccgtcggcccttggcactattggtagccatctttttggaggccatcttagtaat
tctatgaatttaggtctttctcaagttggatcacagatttcccagttacatgaccagaac
catcaatcatctacgacaaacttgttaagtctagggagtgccaattttgaacaagtcatg
ctcccaccaagtcaaacaactctattctcacaaacccagcagcaacaaatgccgaactct
tcatctcctttctttatatcaaattcaaaccaagggttgaaccatgtttttgattatgaa
caacaaaggcagcaacatggtttaatggcaaacaagccaaatattcatgggttgatgcaa
cttcctgaccttcatagcaacactacaaaaatctctccaaatcttttcaacttaggattc
ttctcaggcagtagtaatcccaccaatggtttgaaaaacagtgagaacaatagccaaaac
aatgatacaaatatgtcgtctactggtttcatgatacctgatcatcaatttaacaacgga
ggtggcagtcatgatcgtgttttcctcaacagcaataatccgcatcaggaaaatcaaatg
ccaccccacatgtctgctaccgctttgctgcagaaggcagctcagatgggttcaaccaca
agcaacaataatgccaccacactgttaaaaagctttggaagctcttccaagagcggtgtt
ggtggtggtgatggaaaatcgcacactggtcgacaaacactatcttccaactttgatgct
agaggagaccaggccttgcaatcagagatggagagcgataatcagctgcaaggactaatg
aattctcttagcagtggtggtgcctcctcaatgtttggtgggtacggtgggaatcaaaat
agaaacatgaattttgggaacatgaatgaggctggaaaattcaatccacagaacttctct
ttaagtgttggaaattccaatagaacgactctagattttctaggtgtgggctactcgcag
gtagagcaacaacaacaacgcccagctcatatcaacgtaggctcattggatccagaaatg
gattcatcaactcaggcaactcatatgcgtggtggatcctccaaactccaggggaactga
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