Cynara cardunculus var. scolymus (artichoke): 112503774
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Entry
112503774 CDS
T05604
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112503774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112503774
Transporters [BR:
ccav02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
112503774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
112503774
NCBI-ProteinID:
XP_024963542
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MREATTNLASALMQLYEIMVLQLQSVDQLSDLCSQALAREGEIRSNAAAGPYVEPTTNEA
EAEVACDIPTSGEAAIDEEFDAIPRDDDLPITSAPIAGDVEEEVDEENDDESDEPDLPDS
NNDLDGDDDDDDEDDFTIQFQRPTTATKGVALRYSTSQGGKGKKSIGILSIPYALSSGGW
LSLIALILIALAAYFTGILIRRCMESNPLATSYPDIAGIAFGQKGRIIALLFTCLELYLV
ATGLLILEGDNLHKLSPTFGLKIGSLELDGRHSFVIVAGLIILPSMWLNDLSLLSYLSFG
GVLSSLIVVVCVFCVGMSGAGFHSKGSLVNFKGLPTAVSLYTFCYGAHAMFPALYLSMKQ
KSQFPLVLLVSFMICTMTYVAMAILGYLIYGDNVESQVTLSLPTEKTSSKVAIYTILAAP
IAKYALTIMPIATAIENYLPVKHRDNKVINAVIKMCLLASTVILAIAFPSFESVTSLSGA
ALIVSVSFLLPCACYLKIFEVYKSFGFELVVIGGLIVLAILLGVVGNSVTLYFSSSHFSE
KAFRFTCFIRSRQNEYCTRWIQASPYEVLYGRKRRTPLRWNEVDERQLTGPEFVR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagcgacgaccaacctagccagcgctctaatgcaactatatgagattatggtt
ctccagcttcaaagcgtggaccaactctctgacctatgctctcaagccttagccagagag
ggggagataaggtccaacgctgctgctggaccatatgttgaaccaacaaccaacgaagct
gaagcagaggttgcttgtgatatcccaacctccggtgaagctgctatagatgaggaattt
gatgccatccctcgtgatgatgaccttcccatcacctctgcacctattgcgggtgatgtg
gaagaagaagttgatgaagaaaacgatgatgaaagtgatgaacctgatcttccagactcc
aacaatgatcttgatggcgatgacgacgatgatgatgaagatgacttcaccattcagttc
cagcgtccaacaaccgccaccaaaggagttgccctcagatattccacatcccaggggggc
aaagggaagaagagtattggcatcctctcaatcccatacgcactctcatcaggtggctgg
ctaagcctgattgccctgatcttgatcgctctcgcggcctacttcaccggaattttgatc
cgtcgttgcatggaatccaaccctttggccaccagctatcccgatattgctgggatcgca
tttggtcaaaagggaagaattatagcattgctttttacttgtttagagctctatcttgtt
gccactggtcttctgattcttgaaggtgacaacttacacaaactttctcctacatttggt
ttgaagattggaagcctggaattggatggaaggcactcttttgtgattgtggcagggcta
atcatcctgccatctatgtggctaaatgatctgagccttctctcttatctttcctttggt
ggggtgctctcctcattgatagtggtggtttgcgttttttgtgtcggcatgtcgggggct
ggatttcatagcaaggggagccttgtgaatttcaagggactgccaacagcagttagttta
tacacattctgctatggagctcatgctatgtttcctgccctttacctttctatgaaacag
aaaagccagtttccattagttctacttgtaagtttcatgatctgcacaatgacatatgtg
gcaatggccatactcggttaccttatatatggagacaatgtggaatcacaagtcacactc
agcctaccgaccgagaaaactagttcaaaggtggcaatatacacaattttggccgccccc
attgcaaaatatgctttaaccataatgccaattgctactgctatcgaaaactacttaccc
gttaaacacagagataataaggtaatcaacgcggtgataaagatgtgtttattggctagt
acagttatattagctattgcatttccatcattcgagtctgtaacatctcttagcggagca
gctcttattgtttctgtttctttcttgctcccttgcgcttgttacctgaagatctttgaa
gtgtacaaaagttttggttttgaacttgtcgtgatagggggattaatagtgttggctatt
ctattgggagttgttggcaattctgttacattgtacttttcatcgtcccatttttctgaa
aaagcttttaggtttacttgttttataagaagtcgccaaaatgaatattgcacacgatgg
atccaggcatcaccttatgaagttttgtatggccgaaagcgcagaacgccgttgcgttgg
aatgaagtggatgagaggcagttaactggtccagagtttgttcgg
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