Cynara cardunculus var. scolymus (artichoke): 112503861
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Entry
112503861 CDS
T05604
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112503861
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112503861
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112503861
04121 Ubiquitin system [BR:
ccav04121
]
112503861
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112503861
Peptidases and inhibitors [BR:
ccav01002
]
Metallo peptidases
Family M67
112503861
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Others
Others
112503861
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
112503861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
112503861
NCBI-ProteinID:
XP_024963609
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MTMRSSSGTINVAASAQKINVDDRISLRYYYRIADNILRQAAIFREEKNIIDLYVMLLRF
SSLATETIPFHRDYRASLQRDKLSLKKKSLSALTELEDLKPAVRQKIDDLSRKHAYQSNG
WSHLPQTNLLESSKPLPERSSVRKQTLMNSYSIDKQAPQVNANGYVYQDTRIQMNAHANP
LEEQARRLYLNIPRAKEETLSRHSILGPNGLRGQWQAPSINIGVRYPSNIDLTPVEIPRE
NKLHLVEDGVLIEKISSNLEQEKSTLESITLPNNNNQPCVDEPDSLISFEEKLETPKLDI
IRQPSPPPVLAEVQDLLPTTSPLVKDTGPGSGNPTDGVVSPLELHISTKLMDHFMKLAKS
NTNKNLETCGILAGSLKNRKFYVTALIIPKQEATSDSCQATHEEEIFEVQDKRSLFALGW
IHTHPTQSCFMSSIDVHTHYAYQIMLPEAIAIVMAPRDSSRTHGIFRLTTPGGMGVIRNC
PHRGFHAHDAPSDGNPIYKQCTDVYINPKLKFDVIDLR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaggtcatcttccggaacaatcaatgtagctgccagcgcacagaagataaat
gttgatgatcgaatttccctccgttactactaccggatcgccgataacattctccgacag
gctgctatcttccgagaagagaagaatatcatcgatctatacgtcatgcttctaaggttt
tcaagtttggctacggaaacaataccattccatcgagattatagagcatctcttcagaga
gataagctttctctcaagaagaaatcattgagtgctctaactgagctggaggatttgaag
ccggctgtacgacagaagattgatgatttatccagaaaacatgcatatcaatcaaatggg
tggagtcatcttcctcaaacaaatttgttggaatcatcaaaacctttaccagagagatct
tctgttaggaagcaaaccttgatgaacagttatagcattgataagcaggcaccacaagtt
aatgctaatgggtatgtgtatcaagatactcggattcagatgaacgcacatgctaatcct
ctggaagagcaagctaggcgattatatctgaatattcctcgtgcaaaggaggaaactctc
tccagacattctattttgggcccaaatggacttcgtgggcaatggcaagcccctagcatc
aatattggggttcgttatccgagcaatatagatttgacacccgttgaaatccccagggag
aacaagctgcatcttgtggaggatggtgttttgattgaaaaaattagtagcaacttggag
caagaaaaatcaactctagaatctattactttaccaaacaataacaatcagccatgtgtt
gacgaacctgattccttgatttcgtttgaggaaaaactagaaaccccgaagttggacata
ataagacagccttccccacctcctgttctagcagaggtccaagatttgcttcctacaacc
tcaccactggtcaaggatacggggcctggatctggaaatcccactgatggtgttgtttct
ccccttgagttacacatatccacaaaactgatggaccacttcatgaaattggcaaagtca
aatacaaacaaaaatttagagacatgtggtattcttgctggatcacttaaaaaccgaaaa
ttctatgttacagcactcatcattccaaagcaagaagcaacatcggattcgtgtcaggct
acccacgaggaggaaatatttgaagtgcaagacaaacgatcgctattcgcccttggatgg
atacatacgcatccaacacaatcttgtttcatgtcatctattgatgttcatacacactac
gcatatcagattatgttgccggaggccatagcaatcgtcatggcaccaagagacagttca
agaactcatggcatcttccgtttgacgacacctggtggcatgggagtcattagaaattgt
cctcatcggggtttccatgcacacgatgcaccttcagacggcaatccaatttataaacaa
tgtacagatgtttatattaacccgaagttgaagtttgacgtgattgatctgcggtga
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