Cynara cardunculus var. scolymus (artichoke): 112504090
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Entry
112504090 CDS
T05604
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112504090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112504090
Spliceosome [BR:
ccav03041
]
Complex B
Other components
RES complex
112504090
Complex C
112504090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
112504090
NCBI-ProteinID:
XP_024963823
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MVGPSSGSNSLKEYLKRYXNNEEEEKKKQKKQKKKKKSRPDMNGVLVVDEDPVWQKPVEV
EEEDDESQDEEKPQVDEDIEVKRMKRLEQLKTRRPFGAISEDGSGWVSVXDTAKNLTLDE
LNSGISPLRKRSAHDDTSSPEHELGLSIKTLNSDSSPPRKRRARNDTPSPEAMESDRRNA
DDISPPRRRWKPMSPEVRRRSPLNTSQDAKHGHDIDISPPRKRRPRCDTPSPEPNMKPFR
LGREDSDTTKPRHRTKHAHTSSPEPEMKLTZSFKLEPDLSPPRKGRPQELVNSDLSPPRR
GHHKSSNENRPRASVVGDLSPPRKKREARHQILDDPHRQSVSVSDLSPPRKPVKESGSLX
ELRKTGLVSGKDIKEEIAKTKKEDWLRFRNMDPSISGRDAEGVRRDKRTGERLSKDQIKS
LQKQEEKPKEIKLEWGKGLAQKREAEAKLQELELEKDKPFARTRDDPDLDNMLKDRVRWG
DPMAHLVKKKSFEISLPDMGEDERMKASGFVVPQEVPNHSWLKRGLDAAPNRYGIRPGRH
WDGVDRSNG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtccatcgtcagggtccaactcacttaaggagtatcttaaaagatacgraaat
aatgaggaggaggagaagaaaaagcagaagaagcagaaaaagaaaaagaaaagtaggcct
gatatgaatggcgtcctagttgtggacgaagatcctgtttggcaaaagccagttgaggtt
gaagaagaagatgacgagtcacaagatgaagagaagccgcaagttgatgaagatattgaa
gttaagcgaatgaagagattagagcagcttaaaacccggcgcccttttggtgccatttct
gaggatggaagcggttgggtttcagtcyctgatactgctaaaaacttgactttggatgag
ctaaattctggtatctctccactacgtaaacgtagtgctcatgacgatacgtcttctcca
gaacatgaactgggtctgtctataaagacactgaattcggacagttctccacctcggaaa
agaagggcycggaatgatacaccttccccagaagcaatggagtctgacagacgaaatgct
gatgatatctccccaccacggcgccgttggaaacctatgtcgccagaagttaggagaaga
tcaccgcttaataccagccaggatgctaaacatggccatgatattgacatttcacctcct
cgtaaacgaaggcctcgttgtgatacaccatccccagaacctaacatgaagccttttagg
ttgggcagagaagattcagatacgacaaaaccacgacacagaactaaacatgctcacact
tcatcaccagaacctgagatgaaactaacasagtcctttaagttggagcctgatctttct
cctccccgcaagggtcgccctcaagagttggtaaattctgatctttctcctcctcgacgg
ggtcatcataaatcctctaatgaaaatcgtccacgtgcatctgtagtgggagatctttca
cccccaagaaaaaagagagaggctaggcatcaaattcttgatgatcctcatcgacaatcg
gtatcagtttctgacctttctccaccaagaaaacctgtgaaggaatcaggttccttgasa
gagctgcggaaaactggtttagttagtggcaaagatataaaagaagaaattgctaaaaca
aagaaggaagactggttgaggtttcggaacatggatccttctataagtggccgagatgct
gaaggcgtacgtcgtgacaagagaactggggaacgcttgtcaaaggaccagatcaaatca
cttcaaaagcaggaggagaagccaaaggagataaaattggaatggggcaagggtctggct
cagaagagggaagcagaggccaagctgcaagaattggaacttgagaaggacaaaccattt
gcaaggacaagagatgatcctgatctcgacaatatgctgaaggacagagtgagatggggt
gacccaatggcacatctagtgaagaagaagagttttgaaatttctcttccagatatggga
gaggacgaaagaatgaaggcgtcaggttttgtcgttcctcaggaagttcctaatcacagy
tggttgaagaggggattagatgctgcaccaaaccgctatggtatcagaccaggacgacat
tgggacggtgttgatcgtagtaatggttag
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