Cynara cardunculus var. scolymus (artichoke): 112504113
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Entry
112504113 CDS
T05604
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04145
Phagosome
ccav04517
IgSF CAM signaling
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112504113
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112504113
09142 Cell motility
04814 Motor proteins
112504113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112504113
03036 Chromosome and associated proteins [BR:
ccav03036
]
112504113
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112504113
04147 Exosome [BR:
ccav04147
]
112504113
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112504113
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112504113
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112504113
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112504113
Exosomal proteins of other body fluids (saliva and urine)
112504113
Exosomal proteins of colorectal cancer cells
112504113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112504113
NCBI-ProteinID:
XP_024963840
LinkDB
All DBs
Position
LG_2
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGAEDEGDDGDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatctcgatccacatcggtcaggctggtatccaggttggaaacgcctgc
tgggaactttactgccttgagcatggcattcagcctgatggccagatgccgagtgacaag
actgttggaggaggtgatgatgctttcaacacctttttcagtgaaactggtgcaggaaag
catgtccctcgtgcggtatttgttgatcttgagcccactgtgattgatgaagtgaggact
gggacttatcgccagctctttcaccctgaacaattgataagtggcaaagaagatgccgcc
aacaactttgcacgtggccactacacaattggaaaagagattgttgacctctgtttggac
cgtatcagaaagcttgctgacaactgcactggtctccaaggcttccttgttttcaatgct
gttggtgggggtactgggtctggtttgggctcccttctcttggagcgtctgtccgttgac
tatggaaaaaaatcgaagcttggtttcactgtgtacccatccccacaggtttcaacatca
gttgttgagccctacaacagtgtgctctctactcactccctcttggagcacactgatgtc
gccattcttcttgacaatgaagctatttatgacatctgcaggcgatctcttgacattgag
cgtcccacctataccaaccttaatcgccttgtatctcaggttatctcatcattgactgca
tctttgaggttcgacggtgccttgaatgtggatgtgactgaattccagaccaacttggtt
ccataccccagaatccacttcatgctttcttcgtatgcgcctgtgatctcagccgagaag
gcttatcacgagcaactatctgtagccgagatcactaacagtgcttttgagccctcgtcc
atgatggccaaatgtgatcctcgacacgggaagtacatggcttgttgtctcatgtaccgt
ggtgatgttgtccccaaggatgtgaatgctgcagttgccacaatcaagaccaagagaacc
atccagtttgtggactggtgcccaactgggttcaagtgtggtatcaactaccagccgcca
acggttgtgcctggaggggacctggctaaggtacaaagggcggtttgcatgatctctaac
tcaaccagtgtggcagaggtgttctcccgcattgaccacaagtttgacctcatgtatgcg
aaacgtgcttttgttcactggtatgttggtgagggaatggaggaaggagagttctcggag
gctcgtgaagatcttgcagctcttgagaaggattatgaggaggttggtgctgagggtgcc
gaagatgagggtgatgacggtgacgagtactag
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