Cynara cardunculus var. scolymus (artichoke): 112504248
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Entry
112504248 CDS
T05604
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112504248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112504248
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112504248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
112504248
NCBI-ProteinID:
XP_024963946
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MFRSNNITARIFERQIRTPSPGTSIHRARRFYENIVPGYTIYDVECPDHSFRKFTEDGKY
LISFSRNHQDLIVYRPTWLSFSCKQEDCDTQDLPPKAKKFESFFTQIYSVPLASASELIC
KDFFLYEETNQFGLFATSTAQIYDAPATGGAIQGVPSIEKITFHLLRLEDGVVLDERVFC
NDYINLAHSMGVFLYDDLLAIVSLRYQRIHILQIRDSGSLVDVRAIGEYCLEDDELFLSS
SAQGMSNVDRSAPQHMTMNNAANGPHLEQPAQENPFLTGIKQRLLSFIVRGIRNEEKDET
MRIQSLKKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGAVSRNADNHPAFFAVYNM
ESTEIIAFYQMSSDELYWLFEQFSDHFHVPSKSPPYMNFISSHSNNIHALEQLRSSKNKA
TSFSLFVKKVLASLPFNCQSQSPSPYFDQSLYRFDEKLISAADRHRQSTDHPIKFILRRP
PHTLKFKIKPGPEAGITDCRTKRISSFLFHPIFPLALSVQQTLFLQPAFVNIHFRR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagcaacaatattactgcaaggatatttgagcgtcagattcgaactccttct
cctggtaccagtattcatcgtgctaggagattttacgaaaatatagttccaggttatacg
atatatgatgttgaatgtcctgaccattcattccgcaagttcacagaagatggcaagtac
ctgataagtttcagcagaaaccatcaggatttgatcgtctaccgaccaacatggttatca
ttttcatgcaaacaagaagattgtgatactcaagatcttccaccaaaagcgaagaagttt
gagagtttcttcactcaaatttactctgtgccacttgcttccgcaagtgagctcatatgt
aaggacttcttcctttatgaagagactaaccagttcggactttttgcaacttcaactgca
caaatctacgatgcccctgctactggaggtgctattcagggagttccctcaatcgaaaaa
ataacgttccatcttctgagattggaagatggagttgtacttgatgagagggttttctgc
aatgattacatcaatttggcacacagcatgggtgtttttctatatgatgatttacttgct
atagtctctctccgttatcagcgtattcacatacttcagattagggattcggggagtctt
gttgatgtacgagcaattggggagtattgtcttgaagatgatgaactttttctcagttct
agtgcgcagggcatgtcaaatgttgacagaagcgcaccacaacacatgaccatgaacaat
gctgcaaatggccctcatcttgaacagcctgctcaagaaaatccgttcttgactggtata
aaacaacggttactttcttttatagtccgagggatacggaatgaagaaaaagatgaaact
atgagaatccaatccctcaagaagaagttctactttcactttcaagattatgtagatttg
attatatggaaggtgcaattcttggatcgacatcacttactaatcaagtttgggagtgtc
gatggagcagtgtcccgaaatgctgataaccaccctgcattctttgctgtatataacatg
gaatcaacagaaattattgcattttatcagatgtcctccgatgagctctattggttgttt
gaacagttttctgatcatttccatgtcccatcaaaaagtcccccgtatatgaattttata
tcatctcactcgaacaacattcatgctcttgagcaactgagaagcagtaaaaacaaagct
acgagcttctccctgtttgttaagaaagtgctggcctctttgccgtttaattgtcagtct
cagagtccttcaccctattttgatcagtctctatatagatttgatgaaaagcttatttct
gcggctgaccgacatagacagtcgactgaccatccaatcaagtttatcctaaggaggcct
ccacataccctcaagttcaaaattaaaccaggtcccgaagctggcattacagattgcagg
acaaagaggatatcttcatttctttttcatcccattttccctctcgccctttcggttcag
caaacgctgtttttgcagcctgctttcgtaaatattcattttcgtagataa
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