Cynara cardunculus var. scolymus (artichoke): 112504279
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Entry
112504279 CDS
T05604
Name
(RefSeq) rab9 effector protein with kelch motifs-like
KO
K20285
Rab9 effector protein with kelch motifs
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112504279
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112504279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
112504279
NCBI-ProteinID:
XP_024963986
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MGNNGDIIVNKAMWLYPRFMGFNPSERWGHSSCFSNGFLYVFGGCCGGLHFSDVLVLNLE
TLAWTNLATTGAGPGPRDSHSAVIVGHMMIIFGGTNGCKKVNDIHILDLLTREWTRPNCK
GVAPTPRESHTATVVGHDRLVVFGGSGEGDANYLNDLHILDLRTMRWSSPEPKGDVPVPR
DSHSAVAIENKVFVYGGDCGDRYRGDVDVFNVDTMTWSKYAVQGPSPGVRAGHAAVTVGT
KVFMIGGVGDKQYYNDVWVLDTITCSWTQLEVRGQQPQGRFSHTAIVADSDIAIYGGCGE
DERPLNELLILQLGSDRPNDRYNNCICTVFGSQRDQEKRHLLHEHQANTKRSSPFNSDPM
HTKRKRMSNLKACEVIESEPEEHSLSLSQHSSPSHSDQERTLVKQPSNSAAQTLPFFKHQ
NQISTSSKQIPGTQSNPITILSRATPNLQFVQEQSDHLKNHHATRRDHRNFEALRVQNLI
GAEVHGKVDGAFDSGYLMTAMVNGRIFRGVLFPPGPEVVSRGGFRDSHSRRSPTSHMAQR
NLHVNRAFIRHSNHAPAHGPEPNHHGYQLQDHAVHRPSPVVRSVPGLSLGREQAKVQNHE
LHGVLLTLGGPGSGHGGS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaatggcgatattattgtcaacaaagcaatgtggttgtacccaagattcatg
ggctttaacccttctgaaagatggggtcattcttcttgcttctctaatggtttcctctat
gtctttggtggatgttgtggtggtctacatttcagtgacgttctagtgctaaaccttgaa
accttggcatggaccaatctagcaaccacgggtgccggccctggtccgagggacagtcac
agtgccgtcattgtgggtcacatgatgataatattcggtggaaccaacggctgcaaaaaa
gttaacgacattcacattttggatctcttgacacgcgaatggacacgaccaaactgtaaa
ggagtcgctccgacgcctcgagagagccatacggccactgtcgttggccatgaccgattg
gtggtttttggtggcagtggtgaaggggatgccaattatttgaacgatttgcatattttg
gatctcagaacgatgaggtggagttcacccgaaccgaagggcgatgtccccgtgccgagg
gacagtcatagtgctgtcgccatagaaaacaaagtttttgtctatggaggcgattgcgga
gaccgctaccgtggtgacgtcgatgttttcaatgttgacactatgacttggtcaaagtat
gctgttcaaggcccgtcaccgggggttcgagcaggacacgctgcagtcactgttgggaca
aaggttttcatgatcggtggagttggtgacaagcagtattataacgatgtttgggtgctt
gatacgatcacgtgttcgtggactcagctagaggttcgaggccaacagccgcaagggcgt
ttttcgcatacggctatcgtcgcggattctgatatagccatttacggagggtgtggtgag
gacgagaggccactcaacgagctactcatcttgcagctgggatcggaccgtccaaatgac
cgatataacaactgcatatgcacggtgtttggaagccaacgcgaccaagaaaaaagacac
ctcttacacgaacatcaagccaacacgaaacggtcgtcgccattcaattcagatccgatg
cacacgaaaagaaaaagaatgtcgaatttaaaagcgtgtgaagtgatagaatcagaaccc
gaagaacactcactttccctctcccaacattcatctccgtctcattccgatcaagaacga
actctagtgaaacaaccttcaaactcagccgctcaaactttgccgttttttaagcatcaa
aatcaaatttcaaccagtagcaagcaaatcccaggtacccaatcgaatcctatcacgatc
ctcagtcgagcgacacccaatctgcagttcgtccaagaacaatccgatcacctgaaaaac
catcatgcaactcgccgagatcatagaaactttgaggcattgcgtgttcaaaacctgatt
ggcgcagaagttcacggaaaagttgatggagcattcgactcaggttacttgatgactgca
atggttaacggtcggatcttcagaggagtcttgttccctccagggccagaggttgtttca
agaggaggttttcgcgacagccatagtcgcagatcgcccacgagccatatggctcaaaga
aacctgcatgtaaatcgtgctttcatcaggcactcgaaccatgcaccggctcatggacca
gaaccgaaccatcatggttaccaactccaagatcatgcagtccatagaccatcaccggtg
gttaggtcagttccaggtttatcgttggggagagaacaagcgaaggttcagaaccatgaa
ctccatggtgtgcttcttacgctgggtggtccagggagcgggcacggtggctcgtag
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