Cynara cardunculus var. scolymus (artichoke): 112504308
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Entry
112504308 CDS
T05604
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112504308
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112504308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
PLU-1
ERCC3_RAD25_C
VGPC1_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
112504308
NCBI-ProteinID:
XP_024964011
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MKRGFESIEISDDEWSNHDFDSSRILNKPSSKTPPPPIESFAFRGCGDGGPGGRPSTSKP
SFDSSSDSSDCVEIIKDGAQHALENLEDDDFGEAPSKTLASRGRRFVVDDEDDDEVEEAI
DLGEGEDYESEDLGFGEEVEQEENDDVVGKALHKCANISVELRRELYGSSSVDADRYAEV
DGSSVRIVTHDDICEACGAGGSGFEPVLKPYQLVGVNFLMLLYRKKVAGAILADEMGLGK
TIQAITYLTLLNHLEDDPGPHLIVCPASVLENWERELKKWCPSFTVLQYHGAGRSAHSKQ
LNALSKSRLPPPFNVILVCYSLFERHSAQQKDDRKLLKRWKWSCVLMDEAHALKDRNSYR
WKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFETGDVDLKKLLNAEDTGLI
ARMKSILGPFILRRLKSDVMQQLVPKVQRIEYVCMEMEQIKAYQEAIEEYRAAARARMSK
SGEVKSAHLPRRQISNYFVQFRKIANHPLLVRRIYTNKDVVRFAKKLHPKGVFGAECTLD
RVIEEIKSYSDFSIHRLLLYYGDATSENLSDDHVMISAKCRALAGLLPALMHGGHRVLIF
SQWTSMLDILEWALDVIGVTYRRLDGSTQVTERQTIVDTFNNDTSIFACLLSTRAGGQGL
NLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKDTVDENVYEIAKRKLV
LDAAVLENGIEVENEGESSDKTMGEILSTLLLG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagggttcgagtcaatcgaaatatcagacgacgaatggtcaaaccacgatttt
gattcctcccgaatcctcaataaaccctcttccaaaaccccaccaccccccatcgagtct
ttcgctttcagaggctgtggtgatggcggaccaggaggaaggccgtctacttccaaaccc
tcttttgactcctcctcggactcctccgactgtgttgaaataatcaaggatggagctcaa
cacgcacttgagaatttggaggatgacgactttggagaggctccgtcgaagacgcttgcg
agccgtggacggaggtttgtggttgatgatgaggacgatgatgaggtggaagaggcaatt
gatttgggagagggcgaggattatgaaagtgaagacttggggtttggtgaggaggttgag
caagaagagaatgatgatgttgttgggaaagcgttgcacaagtgtgcgaacatatcggtg
gaattacggagagaattgtatgggtcctcgtcggttgatgcagatcgttatgctgaagtt
gacggttcgtctgttagaattgtcactcatgatgatatatgtgaagcgtgtggggcgggg
gggtcaggttttgagcctgttcttaaaccatatcagcttgttggtgtgaattttcttatg
cttttgtataggaagaaagttgcaggagcaatattggcagatgagatgggtcttggtaag
actattcaggcgataacataccttaccttgctgaaccacttggaagatgatccaggacct
catttgattgtttgtcctgcttctgttttggaaaactgggaaagagagcttaaaaaatgg
tgtccatcatttactgtgctccaataccacggagctggaagatcagctcattctaaacag
ttgaatgctttgtccaaaagtagattgccacccccattcaatgtcattcttgtatgttac
tcactttttgaacgacacagtgcacaacagaaagatgaccgtaagctcctgaagcgttgg
aaatggagttgtgttctgatggatgaagctcatgctttaaaggataggaacagctataga
tggaaaaacttgatgtccgtcgcaagaaatgcaaaccagcggttaatgcttacgggaaca
cctttgcaaaatgatctacatgaactatggtcattgttggagtttatgatgcccgattta
tttgaaaccggagatgtggatttgaaaaagctgctaaatgcagaagacacagggttgatt
gctcgaatgaagtcaatcttgggaccgtttattctaagacgcttaaaatcagacgtaatg
cagcaattagttcctaaggttcaaaggatagaatatgtgtgcatggaaatggaacaaata
aaagcttatcaagaagccattgaggagtatcgtgcagctgcacgtgctcgaatgtcaaag
tctggagaagttaaaagtgctcatcttcctcgacgtcagatttcaaactattttgtccag
ttcagaaagattgcaaatcatccattactggtgaggcgtatttacacaaataaggatgtt
gttcgatttgctaaaaagttgcatcctaaaggtgtatttggtgctgagtgtaccttggac
agagtaattgaggagattaagagttacagtgacttctccattcacaggcttttactttat
tatggtgatgctacttcggaaaatctttcagatgaccatgttatgatttctgcaaagtgc
cgggcgttggctggacttctccctgcacttatgcatggtgggcatcgagttctaattttt
agtcaatggacttcaatgctcgacatcttagagtgggctctagatgtaatcggggttaca
tacagacgtcttgatggcagtactcaggtaacagaaaggcaaacaatcgtggacacattc
aataacgacacttctatatttgcatgcttgctgtcgacaagggctggaggccagggactg
aacctgactggagctgataccgtcatcatacatgacatggattttaaccctcagattgat
cgtcaagccgaagatcgttgtcatcgcatcggccaaaccaaaccagttactatttatagg
ttggtaacaaaggatacagttgatgagaatgtgtacgagattgcaaaaaggaaactggta
cttgatgctgctgtgctcgagaatggtatcgaagtggaaaatgaaggtgaatcgtcggat
aagaccatgggagaaatactttcaaccttgttgttgggatga
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