KEGG   Cynara cardunculus var. scolymus (artichoke): 112504402
Entry
112504402         CDS       T05604                                 
Name
(RefSeq) ras-related protein Rab7-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112504402
   04145 Phagosome
    112504402
   04148 Efferocytosis
    112504402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112504402
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112504402
   04031 GTP-binding proteins [BR:ccav04031]
    112504402
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112504402
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112504402
  Exosomal proteins of other body fluids (saliva and urine)
   112504402
  Exosomal proteins of colorectal cancer cells
   112504402
  Exosomal proteins of bladder cancer cells
   112504402
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112504402
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase cobW nSTAND3 Septin AAA_7 AAA_16 AAA_24 Podovirus_Gp16 IIGP PduV-EutP ATPase NACHT AAA_22 nSTAND1
Other DBs
NCBI-GeneID: 112504402
NCBI-ProteinID: XP_024964111
LinkDB
Position
Unknown
AA seq 211 aa
MLISDRILLKVIVLGDSGVGKTSLMNQYVYNKFSKQYKATIGADFVTKELHIDDKLVTLQ
IWDTAGQERFHSLGVAFYRGADCCILVYDVNIQKTFETLQTWHEEFLKQADPSEPESFPF
VLLGNKVDTHGGSSRAVSVSEKTAREWCALKGNIPYFETSAKENYNVDAAFLCVAKTALA
NEHEHQDVNEMYFQRIPTTISETEQERSCVC
NT seq 636 nt   +upstreamnt  +downstreamnt
atgttgatatctgatcggatattgctcaaggtcattgttctcggcgatagtggggttgga
aagacatctttgatgaatcaatacgtttataacaaattcagcaaacaatacaaggcgacg
atcggtgccgattttgtgacgaaagagttacatatagacgacaagctcgtgacgttgcaa
atatgggacacagctggacaagaaaggtttcatagccttggagttgctttttatagaggg
gctgattgttgcattcttgtttatgatgtcaacattcagaaaacttttgaaaccctacaa
acttggcatgaagagtttctaaaacaggccgatccaagtgaacccgagagcttcccattt
gtgttgctagggaacaaggtggatacacacggagggagcagtcgagctgtaagtgtttcc
gagaagacagcaagagagtggtgtgctttgaagggaaacataccgtacttcgagacatct
gcaaaagagaattacaacgtcgatgctgccttcctttgtgttgcaaaaacggcacttgcc
aatgaacatgaacatcaagatgtaaatgaaatgtattttcagagaattccaacaacaatt
tcagaaaccgagcaagaaagaagttgtgtctgttga

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