Cynara cardunculus var. scolymus (artichoke): 112504673
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Entry
112504673 CDS
T05604
Name
(RefSeq) DNA polymerase delta subunit 3
KO
K03504
DNA polymerase delta subunit 3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03030
DNA replication
ccav03410
Base excision repair
ccav03420
Nucleotide excision repair
ccav03430
Mismatch repair
ccav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112504673
03410 Base excision repair
112504673
03420 Nucleotide excision repair
112504673
03430 Mismatch repair
112504673
03440 Homologous recombination
112504673
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112504673
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112504673
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112504673
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112504673
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
112504673
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
112504673
MMR (mismatch excision repair)
DNA polymerase delta complex
112504673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Trp_dioxygenase
QLQ
Motif
Other DBs
NCBI-GeneID:
112504673
NCBI-ProteinID:
XP_024964388
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All DBs
Position
LG 2:67303754..67313326
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AA seq
521 aa
AA seq
DB search
MADIETLGILDEIQALVSDKLQVVSYKWLSRNFLVPSNTAKRLLQEFVEKNGSQLEVVYS
LSGWLKNNPSAYHIKLVLGSKLSEAQEEFSDRCSIQVYSVQACIPKDPAVLWNTEYIQAE
ELFKEPPNVVNCLRDNRFCGVSNSYVKRNGEGPPVSSAALPLKNVGVCGPSRTSSSKQTS
DNLLRQERRVEQSDPKPDQGKDIQSGSHQAQALKQDGKPVAHKEQVPQLPPNKKRNQNDK
SSSGTAGSLASIWGRASSKPKPDSASIKTENAIPISNDAQVRANESVEDGSSDDDDGQMN
FKRVSNGEGNNRKRRVVFDFSDEDDDGKDTVNLASPDPPKKQVSLDSKKSTKTPSLENKN
LDFDEPKEENVKVEKEKVAKVVPKSTLKEESSERKRGPASNENQCPDKDDMNQKDKTSDA
AQNVLKKRKVLKTRIDERGREVTEVVWEDDEKETKPDDNTRKDTGDSNTANNVVNRPPAA
APKKSPALGNASSHATGKAGNKKAGTKDPKQGNIMSFFKKV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcgaaaccctaggtattcttgatgagatacaagcacttgtttccgataag
cttcaagtggtttcttacaaatggctgagtcggaactttttggtgccatcaaatactgcc
aagaggctgcttcaagagtttgtggaaaagaatggaagtcaactggaagttgtatattct
ctgtctggatggttgaagaataatccttcagcttaccatataaagcttgttttgggctct
aaactttcggaagcccaagaagaatttagtgacagatgttcaattcaagtctatagtgtc
caagcttgtatccctaaggatccagcagtgctttggaatactgaatacatacaagcagaa
gagcttttcaaggagcccccaaatgttgttaattgcttgcgggataaccggttttgtggg
gtctcaaattcgtatgtaaaacgcaatggtgagggaccacctgtaagcagtgcagctcta
ccgttgaaaaatgtaggagtctgtggaccatccagaactagttcttctaagcaaacttct
gacaatttattacgtcaagaaagaagggttgagcaatcagaccctaagcctgatcagggt
aaagatattcaaagcggaagtcatcaggcacaagctctaaaacaggatggcaaaccagtt
gcacataaagagcaagttcctcaattgcctcctaacaaaaagagaaaccagaatgataaa
agctcttctgggactgcaggctcattagctagtatatggggtcgtgcatcttcaaaacca
aagccggattctgcttcaataaagactgagaacgccattcctatttctaatgatgctcaa
gtacgtgctaatgaatcggtggaggatggaagcagtgacgatgatgatgggcaaatgaac
ttcaagagagtgtccaatggtgaaggcaataatagaaagaggagggttgtctttgatttc
tctgatgaagatgatgacggcaaagatacagtgaatctagcctcgccagatcctccaaag
aagcaagtttctcttgattcaaagaaaagtactaaaactccaagtctggaaaataagaat
ttggattttgatgaaccaaaggaagagaatgtgaaggttgagaaagaaaaggtggccaaa
gttgttcccaagtcgacgttgaaagaagaaagcagtgagaggaaaaggggtcctgcttca
aacgagaatcaatgccctgacaaggatgatatgaatcagaaagataaaacaagtgatgca
gctcaaaatgtacttaaaaagagaaaagttttgaagacacgtatcgatgaacgtgggaga
gaagtaactgaggttgtttgggaggatgatgagaaagagacaaagcctgatgacaataca
agaaaagatacaggtgatagtaatacggcaaacaatgttgtcaacaggccacctgcagca
gctcccaagaaatcacctgcactaggtaatgcctcgtcccatgcaacagggaaagctgga
aacaagaaagccggtaccaaggatcctaagcaggggaatatcatgtcattcttcaagaag
gtttga
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