Cynara cardunculus var. scolymus (artichoke): 112504766
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Entry
112504766 CDS
T05604
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112504766
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112504766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
FlgT_M
Motif
Other DBs
NCBI-GeneID:
112504766
NCBI-ProteinID:
XP_024964486
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MNSVFNEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELIVTTWEKLFHSSEVAQKVPL
LYLANDILQNSKRKGNEFVSEFWKVLPGALKDLIEKGDDHGKNVVTRLVNIWEERKVFGS
RAKNIKAVLLGEESPQPLEFTKKRSRSVKIVKRDLRSIRTKLTIGSTAERIVSAFHLVVS
EHHGEDEEMNKCKSAVHRVRKMEKEIDLALTNAKDPKRKTLSKVLEEEEYLLKQCIEKLK
VVEANRLTLVSQLRDALNDQESELENVRTQMQVAQAQSEEAENMRKQLDDENYVADSKPS
TATPPSVAADAKAGSKKSAADIAAEVADRLAASTSSQYIMSSVLSTFAAEEAKNAGLTKT
TTVSNSFSAVSKPERPLPVSDHNVFMTSQTLNLSANGPYQTVLIPQPTLIPNSQAQYHSL
SNPHSQQYMQQPSGGIVTSYAYANVPPLPAGPPPPPPPSYMMSPMVPLTHQQMQMSHQAA
LPQQAPTPSFRPIQPSGMVFYAHPHHSQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtgttcaatgaacagatacttgcagacaagctatcaaagcttaacagcact
caacagtgtattgaaacgttgtctcattggtgtatatttcaccgaagcaaagcagaactg
attgttacaacatgggagaaactgttccatagttctgaggtggctcagaaggttcctctt
ctgtatcttgcaaatgatatccttcagaacagcaagcgtaaaggaaatgaatttgtctct
gagttttggaaggtcctcccgggagccctcaaagatcttattgagaaaggcgatgatcat
gggaaaaatgttgtcacacgactggttaatatatgggaagaaaggaaagtatttggatct
cgtgcaaagaacatcaaagctgtgttgctaggagaagaatcacctcaacccctggagttc
actaagaaacgttctcgttctgtgaaaatagtcaagagagatttacgatctataaggacg
aaactgaccatcggtagtacagcggagagaattgtctcagcttttcacttggttgtcagt
gaacaccatggtgaagatgaagagatgaataaatgcaaatctgctgttcaccgtgttagg
aaaatggagaaagaaattgatttggccttgacaaatgcaaaagatccaaagaggaaaact
ttgtccaaagtactggaggaagaggaatatctcttgaagcaatgtattgagaaacttaaa
gttgttgaagcaaatagattgactcttgtgtctcagttgcgcgatgcattgaatgaccag
gaatctgagttagagaatgttcgcactcaaatgcaggtagcacaagcacaatcggaagaa
gcagaaaacatgcgtaaacagctagatgatgaaaattatgtggcagattcaaaaccttcc
actgccacgccaccatcagttgctgccgatgcaaaagcgggatctaaaaagtctgccgcc
gatatagcagcagaagtggcagatcggcttgctgcctctacctcctctcagtatattatg
tcatctgttctctctacatttgcagccgaagaagccaaaaacgctgggctcacaaagacc
acaacggtttccaattctttttcagccgtatcaaaaccagaacgaccccttcccgtctcc
gatcacaacgtatttatgacttcacaaacactaaatctatctgcaaacggcccttaccaa
acggttttaattccacaaccgactctcattcctaactctcaagctcaatatcattcactt
tcaaacccacattcccagcaatatatgcaacaaccctctggtgggattgtgacctcatat
gcttatgctaatgtgccgccgttgcctgcaggcccgcccccgcctccaccaccatcttat
atgatgagtccgatggttcctttgactcaccagcaaatgcagatgagccatcaggcggct
ttgcctcagcaagccccgactcctagttttaggcctatacagccatctggaatggtgttt
tatgctcaccctcatcattcacagtga
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