Cynara cardunculus var. scolymus (artichoke): 112505044
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Entry
112505044 CDS
T05604
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112505044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112505044
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112505044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_25
AAA_29
AAA_16
AAA
AAA_28
RsgA_GTPase
TIP49
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
112505044
NCBI-ProteinID:
XP_024964757
LinkDB
All DBs
Position
Unknown
AA seq
1447 aa
AA seq
DB search
MMLEGEEIFRVSSARISSSNIWRNSGRDFFSRSSFEEEDDEEALKWAAIQKLPTNLRLER
GILTEEKGLLTEINIKNLGLSEKKNLLDRLVRIAEEDNEKFLLKLKERIDRVGLQLPTIE
VRFEHLNVDAEAYVGGRALPTIVNFLVNILQGSLNFLHLLPSRKKTFPILHDVSGIVKPG
RMTLLLGPPSSGKTTLLLALAGKLGSDLQVSGRVTYNGHEMGEFVPQRTSAYISQYDLHI
GEMTVRETLAFSARCQGVGANYEMLAELSRREKEANIKPDPDLDIYMKAASLEGQEASVV
TEYVMKILGLEICADIVVGDEMFRGISGGQKKRVTTGEMMVGPARALFMDEISTGLDSST
TFQIVNSIRQSIHILQGTSMISLLQPAPETYDLFDDIILLSDGQVVYQGPRENVLEFFEH
MGFKCPERKAVADFLQEVTSKKDQEQYWARISEPYSFVTVQEFTEAFQLFHVGRRLGDDL
AAPFDRTKSHPAALTTKKYGVTRKELLKACVSREYLLMKRNSFVYIFKMIQLILLATTSM
TLFLRTEMPKKTIVDGTVYMGALFFTILTMTFNGFSELALSIMKLPVFYKQRDLLFFPPW
VYSLPTWILKIPVTVVEAATWVIMTYYVVGYDPDVGRFFRQLLVLICIQQMASAVFRFIA
ALGRNIIVANTIGSFSFLAILVLGGFILSRDDIKKWWAWGYWLSPLMYGQNGMAVNEFLG
KSWRQVLPNSTESLGVAVLKSRGLFPEAKWYWISVGALVGYVFLFNIFFILALTYLNPLG
KPQAIQSEETVAARNALKKGDPIELSVRASSEMKNEVRTSRSMSSRVGSIIEAHKKKKHG
MVLPFVPLSLTFDEIRYAVDMPQEMKAEGITQQQLELLKGVGGCFRPGVLTALMGISGAG
KTTLMDVLAGRKTGGYTKGRITISGYPKKQETFARIAGYCEQTDIHSPHVTVSESLQYSA
WLRLPAEVDSATREMFIEEVMELVELTSLSEALVGLPGVNGLSTEQRKRLTIAVELVANP
SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPNIDIFDAFDELFLLKRGGE
QIYFGPLGRHCSQLIKYFEDIDGVNKIKDGYNPATWMLEVTSEAQEAALGVNFGDVYRNS
ELYKRNKELIKENSQPIPGSSDIHFRTQYSQSFWTQCMACLWKQHWSYWRNPPYSAVRFL
FTTFIALMFGTIFWDMGSKRDKQQDLFNAMGSMYAAVTFIGVQNAASVQPVVSIERTVFY
RERAAGMYSAFPYAFGQIMIEVPYIFVQTIVYGIIVYAMIGFEWTLVKFFWYLFFMYFTL
LYFTFYGMMTVAVTPNHNIAAIISSAFYALWNLFSGFIVPRTRIPIWWRWYYYICPVAWT
LYGLVASQFGDMDDELESGQTVSEFVSSYFGFEHDFIGYVALIVVGFAVLFGFIFAYSIR
AFNFQTR
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgatgttggagggtgaagaaatatttagagttagcagtgcacgtataagcagttctaat
atatggagaaacagtggtagagatttcttttcaaggtcttcatttgaagaagaagatgat
gaagaagcattaaaatgggctgctatacagaaactgccaacaaatctccggttagagaga
ggcatactaaccgaagaaaagggtctactaacagaaatcaatatcaagaacctcggattg
tctgagaaaaaaaatcttctagataggctagttagaatagctgaggaagacaatgaaaag
ttcttgctgaagcttaaggaaaggattgatcgagttggacttcaacttccgactatcgag
gtccgttttgagcacttgaatgttgatgcagaagcttatgttggtggcagagcattgcct
actatagtcaacttcttggtcaacatcctacagggatcgttaaattttctgcatcttctt
cccagcagaaagaaaacattcccaatccttcatgatgtgagtggtattgttaagcctggc
agaatgacattgctgttaggcccaccaagctcagggaaaacaacgctgcttttggcattg
gctggaaaacttgggtctgatttacaggtatccggaagagtgacttacaatgggcatgaa
atgggggagtttgtcccacaaagaacatctgcttatataagtcaatatgatctccatatt
ggagaaatgacagtcagagaaacattagctttctctgccagatgccaaggagttggagca
aattatgaaatgttggcagaactgtctagaagagagaaggaagcaaatatcaagcctgat
cctgatcttgacatctacatgaaggcagcatcgctagaagggcaagaagctagtgttgtc
accgagtatgttatgaagattttaggtcttgaaatctgtgcggatattgtagtaggagat
gaaatgttcagaggtatttctgggggacaaaaaaagcgagtcacgacaggggaaatgatg
gttggaccagcaagagcactgtttatggatgagatatcaacgggtttggacagttcaaca
acgttccaaatagtgaattcaatcaggcaatcaattcacattcttcaaggaacttccatg
atctcactcctccaacctgccccagaaacttatgacttgtttgatgatataatacttctt
tcagatggtcaagttgtgtatcaaggtccacgagaaaatgtgctagagttctttgagcac
atgggtttcaaatgtcccgagagaaaagcagttgcggacttcttacaagaagtaacatca
aaaaaagatcaagagcaatattgggctagaattagtgaaccttatagtttcgttactgta
caagaattcacagaagcatttcagttgttccatgtgggaagaaggcttggtgatgacctt
gctgctccatttgacagaaccaagagccaccctgcagctttgactactaagaaatatggt
gttaccagaaaggaactattgaaagcttgtgtatctagagagtacctgcttatgaaaagg
aactcttttgtgtacatattcaagatgatacaacttattcttttggctactacgtcaatg
acactattcctacgaacagagatgccaaagaaaacaatagtggatggaacagtttacatg
ggtgctctatttttcacaatactcaccatgacattcaatggattctcggagcttgcatta
agcataatgaaacttcctgtgttctacaagcaaagagaccttctcttctttcctccttgg
gtatactcgctacccacatggatcctcaagatcccagtgacagttgttgaagctgccact
tgggtaatcatgacgtattatgtcgtaggatatgatccagatgttggaaggttcttcaga
caattacttgtgctcatctgcattcaacagatggcttctgcagtatttcgtttcatagca
gctttaggacggaatatcattgtggccaacacaattggctcattctcatttcttgccatt
cttgtgcttggtggtttcatcttgtcccgagatgatataaagaagtggtgggcatggggt
tattggctttcacctttgatgtatgggcagaatggtatggctgtcaatgaattccttgga
aagagttggagacaggttttaccaaactccacagaatcattaggtgttgctgtcctaaag
tctcgaggacttttcccagaagcaaaatggtattggatttccgtaggtgctttagttgga
tatgttttcctcttcaatatcttcttcatcttggctctcacatacctcaaccccttaggg
aagcctcaagcaattcaatctgaagaaacagtggctgcaaggaatgctttaaaaaaagga
gatccaattgaattatcagtgagagcttcatcagaaatgaagaatgaagttcgaacatca
agatcaatgtcatcaagagttggcagtataatagaagcgcataagaaaaagaagcatggg
atggttctaccttttgttcccctttcccttacatttgatgaaatcagatatgcggttgat
atgcctcaggaaatgaaagctgaaggtatcacccaacagcagctagaactattaaagggt
gttggtggttgttttaggccaggagttctcacagctttaatggggatcagtggtgctggt
aagaccactttaatggatgtcttagctggacgaaaaacaggtgggtacactaagggaagg
atcactatctctgggtacccaaagaagcaagaaacatttgctcgcattgcaggatattgt
gagcaaactgatattcactccccgcatgtcacagtctctgagtccttgcaatattctgca
tggcttcgattacctgctgaagttgattcagcaaccagagagatgtttattgaggaggtg
atggagcttgtggagctaacttcactgagcgaagcacttgtgggattgcccggcgtgaat
gggctttcaactgaacaacgcaagaggctgacaatcgcagttgagctagtagccaacccg
tctataatttttatggatgagcctacgtcaggattagatgcaagggcggcagcaatagtc
atgagaacagtgagaaacacggttgacacaggtagaacagtggtgtgcacgatacatcag
ccaaacattgacatctttgacgcttttgatgagctatttcttttaaaacgaggaggggaa
caaatatactttggtccattaggacgtcattgttctcagttaatcaagtattttgaggac
attgatggagtgaataaaattaaagacggctacaatccggcaacttggatgttggaggtg
acctctgaagcgcaggaagcagccttaggggttaactttggtgacgtatacagaaactca
gaactatacaagagaaataaagagttgataaaggaaaatagccaacctatacctggttcc
tctgatatacatttccgtactcaatattcacaatcgttctggacacaatgcatggcatgt
ctatggaaacaacattggtcatattggcgaaacccgccatactctgcagtgaggttccta
ttcacaacattcattgccttgatgtttggcacaatcttctgggatatgggctccaaaagg
gataagcaacaagatctttttaatgcaatgggttctatgtacgctgctgtaacatttatt
ggagtacaaaatgctgcatcagtccaacccgttgtttctattgagaggacagtcttttac
agggaaagagctgctgggatgtactcggcatttccgtatgcctttggacagattatgatt
gaggtgccctacatttttgttcaaaccattgtctacggaattattgtatacgcaatgatt
ggattcgagtggacactagtgaagttcttttggtatctcttctttatgtacttcacatta
ctatacttcacattttatggaatgatgacagtcgcggtcacccctaaccacaacatcgct
gctataatctcatctgctttttatgcattatggaacctattctcgggattcattgttcca
aggacaaggatccccatatggtggagatggtactactatatctgccctgttgcttggaca
ttatacggcttggttgcttcacaatttggtgatatggatgacgagctagaatcaggccaa
acagtttcagagttcgtcagcagttattttgggtttgaacatgactttataggctatgtt
gcattaatcgtcgttggatttgccgtcctcttcggatttatttttgcatactccatcagg
gcatttaacttccaaacacggtaa
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integrated database retrieval system
