Cynara cardunculus var. scolymus (artichoke): 112505104
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Entry
112505104 CDS
T05604
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112505104
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112505104
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
112505104
NCBI-ProteinID:
XP_024964825
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MHPGFLLLTTFSFYVFSSDELWLTRAQGSSMDVTAGVNLSFQGNYVVISNGIVKVTLSNP
QVYVTGIQYDGIDNLLDVINEETNRGYWDVVWSDWGATKTTGSMERLEGTHCDVIVQTKE
QVELSFSRTWTYSNKGKLVPLKIDKRFILLHGSSGFYTYAILEHLAEWPSFNLDYTRLVF
KLRRNKFHYMVVSDYRKRDMPSAIDRTPERSQILDYPEAVLLVDPIEPRFKGEVDDKYQY
TSELKDLGVHGWISNDPPVGFWHITPSNEFKVGGPTKSELTSHVGPTTQTLFSSAHYGGN
DMVLKFGRGEWWKKVLGPIFIYLNTVPNRKDLHMLWDNAKNQMSTEVKKWPYDFLASKDF
QSASQRGAVTGRLLVLDRFITGGRSVPAKRAYVGLAPPGDIGSWQRENKKYQFWTETNEK
GHFSIPNVIAGKYNLYAWVPGFIGDFRNSEIIDIASRVNINLGDLLYEPPRDGPTLWEIG
VPDRTAAEFFIPDPNPKYLNKFLLIYGPNRYRQYGLWDRYTDLNPYHDLVYTVGQSNYTK
DFFFAHVLRRMSTGVYVKTTWTIRFSHYNFNKSETYVLRLALASAHEANIQVRINDLHKL
PLFSTGIIGRGNAIARHGIHGLYWLFNIEIPGTNLYTNGVNCIYLTQANNGSRFQGVMYN
YIRLEARR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctggattcctcttgctcactactttcagcttctacgttttctcatcagatgag
ttatggctgacaagagctcaaggatcatcaatggatgttacagcaggggtaaacctcagc
tttcaaggcaattatgtggtaataagtaacggcatagttaaggtcaccctatcaaatccg
caagtatatgtgacgggcatacaatacgacgggatcgacaatttgctcgatgtaataaac
gaagaaactaatcgagggtattgggatgttgtttggagtgattggggagccaccaaaacc
acaggttccatggaaagacttgaaggaacgcattgtgatgttatagtacaaactaaagaa
caagtggaactctccttttcgagaacatggacttattccaacaagggcaagctagtccct
cttaagatcgacaaaaggtttattttgcttcatgggtcatcaggattttatacatatgca
atattggaacatttagcagaatggccaagtttcaatcttgattatacaagacttgttttc
aagctgaggagaaacaagtttcattatatggttgtgtctgattatcgaaaacgggatatg
ccttcagcaatcgatcggactccagaaagaagccaaatattagattatcctgaggcggtc
cttcttgtagaccccattgagcctcggttcaaaggcgaggtagatgataaatatcaatac
acaagtgaattaaaggatcttggtgtccatggatggataagtaatgatccaccggtggga
ttttggcatattacgccaagtaatgagtttaaggttggaggtcctaccaagtcagagtta
acttctcatgttgggcctacaactcaaactcttttttcgagtgctcattatggcggaaat
gatatggtgctgaaatttggcagaggagagtggtggaagaaagtcttaggtccgattttt
atatatctcaatactgttccaaacagaaaagaccttcatatgctttgggataatgccaaa
aaccagatgtctactgaagttaaaaaatggccatatgactttcttgcttcgaaggacttt
caatccgctagtcaacggggtgccgttacgggtagattactcgtcctagataggttcatt
actggtggtcgtagtgtacccgcaaagagggcttatgtcgggttagcaccaccgggggat
ataggatcatggcaaagagaaaacaagaaataccaattttggaccgaaacaaatgagaaa
ggtcacttttcaattccaaacgtaatcgccggcaaatacaatctatacgcttgggtcccg
ggatttattggtgattttagaaattctgagattattgatattgcttcaagggttaatatc
aatttgggtgatcttttatatgaacccccaagagatgggccaactttatgggagatcggt
gttccagatcgaactgcggcagaatttttcatccctgatcctaacccgaaataccttaac
aagttccttctcatttacggccctaacaggtacagacaatatggattatgggacagatac
acagacctaaacccttatcatgatttagtgtacacagttggacagagtaattatacaaaa
gattttttctttgcgcatgtcttgaggagaatgagtacaggtgtttacgtgaagacaaca
tggacgatcaggtttagccattataatttcaacaaaagtgagacatatgtccttagattg
gcacttgcttctgcacatgaggctaatatacaggttcgtattaatgatttacacaagcta
cctttattttcaacggggataattgggagaggcaatgcaattgcaaggcatggaatacac
ggtttgtattggctattcaatatcgaaataccaggcaccaatctgtatactaatggagtg
aattgcatctacttaacgcaagcaaacaacgggagtcgttttcaaggagtaatgtacaat
tacatccgtttagaagctcgtcgttaa
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