Cynara cardunculus var. scolymus (artichoke): 112505213
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Entry
112505213 CDS
T05604
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112505213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112505213
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112505213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Agd3_CE
Motif
Other DBs
NCBI-GeneID:
112505213
NCBI-ProteinID:
XP_024964920
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MSRSSRTLYVGNLPGDIREREVEDLFYKYGPIARIDLKVPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVGRTYKVELAHGGRGNSSATDRHNSHSSGRGGHGGVSRRSDYRVL
VTGLPSSASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFR
NAFSRGVIRVKEYDSSRSRSRSRSRSKSYSRSRSRSRSKSPKAKSSRRSKSRSRSASPRS
RSGSEPRPSARSPSRSRSPPPSRPKRVSKSPKRRSPSKSRSPSRSRSRSRSKSLSR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctccagcagaacgctttatgttggtaatctacctggagatattcgcgagcgt
gaagtggaggatttgttttacaagtatggtccaatagcccgcatcgatttgaaagtccca
ccaagacctccaggttatgcttttgttgagtttgaagaggctcgagatgctgaagatgct
atcaggggtcgtgatggatatgattttgatgggcacagattaagggtcggtcgcacatac
aaggtggaacttgcccatggtggccgtggcaactcatctgctacagatcgtcataatagc
cacagcagtggtcggggtggtcacggtggtgtttcsagacgctccgattatagagtttta
gtcactgggttgccctcttctgcttcatggcaagaccttaaggatcacatgcgtcgagct
ggggatgtttgcttctcccaagtttttaaggagggaggtggcaccaccgggattgtggac
tacacaaactatgatgacatgaaatatgctataaggaaattggatgactctgagttccgg
aatgctttctctcgcggagttatacgtgtgaaggagtatgattctagccgctctaggagc
cgtagtcgcagccggagcaagagctatagccgtagtcgcagcagaagccgaagcaaatcc
ccaaaagcaaaatcttctcgccgctcaaaatcccgttcgaggtctgcttctcctcgttct
cgttctggatcagaaccccgcccatctgcaagatctccttcaagatccagatctccgcca
ccttctcgcccaaagcgggttagtaaaagtcccaaaagacgcagtcctagtaagagcagg
agtccgagcagaagcaggagtcgtagcaggagcaagagtttatcacggtga
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