Cynara cardunculus var. scolymus (artichoke): 112505268
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Entry
112505268 CDS
T05604
Name
(RefSeq) glutamate receptor 1.2-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112505268
Ion channels [BR:
ccav04040
]
Ligand-gated channels
Glutamate (ionotropic)
112505268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
SBP_bac_3
Peripla_BP_6
Lig_chan
Lig_chan-Glu_bd
Patched
DUF6112
Motif
Other DBs
NCBI-GeneID:
112505268
NCBI-ProteinID:
XP_024964968
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
VDVGIVLHMESWIGKSIHNNIMMALSDFYARNGGCRTRIVIHTRDSKGDRLQALSSVVDL
LNTVKVHXIIGPETYIGSELLGSFTDKPKVPIFCFACKSLMLYPYMFQIKEDEFAMAKSI
AAVIESYKCRDVIFMHEDANHGSDLLQYLLESFQDKNIRITYRSVVSASAKHDQINHELH
KLMSVHTTVVIVDLSPSLASRVFLNAKRLGMMSKEYAWILTQKTIEILQSDEFEVIESLQ
GALGFRSYIPASSRLHFLTKRWKEEFXREVPMLXIWAYDTIWALAEXIXRVGVPQNGSIL
LSEILKINGFKGMSGEFRLSERKVMSNGFEILNAIDYGXRKVGYWTSSKGIRRAHQQLNN
VALHSRTNIEDVIWPEGSTTTPKGWTIRVGPGKKLRISIRNGLKFKHFVNAVHDDKTNVT
TXTGFSVEVFQACIHALPYEVPYEFIPFEKGSYDALIEKVYKKEIDGVLGDSTILANRSE
LVDFXATYSDLGLGTLAKIKRKDMWIFLKPLDVNLSLTVATFVIFTGFIVWAIEAMNQES
EIASSQRIGTIFWLFLVLILITSYTATLSALMTVEQFELTSKGGIVGFHGGSFFGGVTVK
NMNFTDSKQKSYHTYDDYAEALSKGGKNGGADAIVDEVPYIKMFLGMYPTDYAMVSSQPI
TSGFGFIFAKGSSLATDMSRAIAKLREDGTLRSLEKKWFESEFPVLPEDSSTIPKTLNLD
RFGGLFVISGISSALALVISVIYLVSAKMEM
NT seq
2258 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgtagggattgttcttcacatggaatcatggatcggaaaatccattcacaaca
acattatgatggcattatcggatttctatgctcgtaatggtggttgcagaacaaggattg
ttatccacacaagggactcgaagggagatcgattacaagctctatcatctgtagttgatc
ttctgaataccgttaaggtgcacrcaatcataggcccagaaacatatatcggatcagagc
tactgggttcattcactgataaacccaaagttcccatcttttgttttgcttgtaaatcct
taatgctatatccttacatgttccaaattaaagaagatgaattcgccatggccaaaagca
ttgctgctgttatcgagtcatataaatgcagagatgttatctttatgcatgaggacgcta
atcatggatcagatctgttacaatatctgttggaatcattccaggacaaaaacatacgaa
ttacttatagaagcgttgtttctgcctccgccaaacatgatcaaatcaatcatgagttgc
ataagctcatgagtgttcatacaactgtggttatcgtagatctatcaccttcattagcat
ccagggtttttctaaatgcaaagaggttaggaatgatgagcaaagaatatgcatggattt
taactcaaaaaaccattgaaatcttgcaatcagatgaatttgaagttatcgagtcgttgc
aaggagcacttggttttcggtcttatattccagcatcaagcaggctgcatttcttaacaa
aaagatggaaagaagagttctmaagagaagtgcctatgcttrccatttgggcgtatgaca
caatatgggcacttgcagagtytattragagggttggagtcccacaaaatggttcaatac
tactaagtgaaattttgaagatcaatggattyaaaggtatgagtggagagtttcggctca
gtgaacgaaaagtgatgtccaatggatttgagatcctaaatgcaatcgactatggagasa
ggaaagtgggatattggacatcgtcaaaaggaattaggagagcrcaccagcagttaaaca
atgttgctctacattctcgtactaatatagaagatgttatttggcctgaagggtctacaa
ccactccaaaaggttggacaatacgagtgggtcctggtaaaaagttaagaattagtatcc
gaaatggactaaaatttaagcacttcgtaaatgcagttcatgatgataaaacaaatgtca
caactgscactgggttttctgttgaggttttccaggcttgcattcatgcattaccatatg
aagtgccttacgaattcattccatttgagaaaggaagytacgacgcacttatagaaaagg
tctataagaaggaaattgatggggtcctaggtgattcaacgattctggccaacagatccg
aacttgttgatttcayagcaacttactctgatcttggtttaggaacactggcaaaaatca
agagaaaagacatgtggatcttcttgaagccattggatgtaaatctatcgctaactgttg
caacttttgtcatcttcactggcttcattgtgtgggctattgaagctatgaatcaagaat
cagaaatcgcatcatckcaacgaattggaacgatcttttggttattcttggttcttatct
tgattacgagttacacggcaacattgtccgcactgatgacagttgaacagtttgaactaa
cttcaaaaggaggaattgtggggtttcacggtgggtctttctttggaggagtgacagtca
agaatatgaactttactgattcgaagcaaaaatcatatcatacctacgatgattatgctg
aggcgttatcaaaaggtggaaagaatggtggcgctgatgccattgttgatgaagttcctt
acatcaagatgttccttggcatgtaccctactgactatgccatggtctcatctcaaccta
ttacttctggtttcggctttatctttgcaaaaggatcgtcgctagcaacmgacatgtcga
gggctattgctaaattaagagaagatggaacactacgaagtttggagaagaagtggtttg
agagtgagtttcctgtattacccgaagattcttcgacaattcctaaaaccttgaaccttg
ataggtttggtggtttgttcgttattagtgggatatcttcggctttagcccttgtaatct
ctgtgatttacttggtgtcggctaagatggagatgtag
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