Cynara cardunculus var. scolymus (artichoke): 112505327
Help
Entry
112505327 CDS
T05604
Name
(RefSeq) germacrene A synthase long form-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112505327
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112505327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
112505327
NCBI-ProteinID:
XP_024965019
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MCLHDYAXVFSKFKDNSTGTFKEYVMSDVKGMLGLYESXYLRLQGEDILDEALEFTZTRL
KXIXCTLKGNLARQVNQVLKRPFHNGMPMVEARLYFSTYKEESXSDESIIXLAKVNFNYL
QLLQKEELRIVSQWWKDMKFQSSFPYIRDRVPEIYLWILGLYLEPCYSQARIIVTKITLF
LVVLDDTYDAYATIDEIRIITDAINTWEIGAVDQLPEYIKPFYRILLNEYDKLEKEYTNE
GRAYNVHASKQAFQEIARGYLEEAEWLHKGYVPTFPEYMKNGLITSAYNVISKSALVGMG
AIANENALAWYETHPKILKASELISRLQDDVMTFQFERKRGQSVTXVDAYIKEYDVSEEV
AXKEIKKIIENAWKDINXGCLKPXAVSRALXTPILNLARXIDVVYKFGDCFTFPGKTLKD
YITLLFITPLTN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgcatgattatgcakatgtgtttagcaaattcaaagacaatagtaccggtaca
ttcaaggagtatgttatgagcgatgtgaagggtatgttgggattatatgaatcgrcatac
ttgaggctacaaggagaagatatcttagatgaagctttggaattcactsagactcgatta
aagraaatarcgtgcacgttgaagggaaatctagcacgacaagtgaatcaagtccttaag
agacccttccayaatgggatgccaatggtagaagcgaggctttattttagcacatacaaa
gaagaatcttygagtgaygaatcgataataraacttgctaaagtcaatttcaactatttg
caactactgcaraaggaagaactacgtatcgtctctcagtggtggaaagatatgaaattt
caaagctcgttcccttacataagagatcgagtaccggagatatacctatggattttaggg
ttatatctggagccttgttactctcaggcacgaatcatagtgaccaaaatcaccttgttc
ctcgtggttttagatgacacgtatgatgcatacgctacgattgacgagatccggattatc
acagatgcaataaatacgtgggaaattggggcggtcgatcaacttcctgagtatatcaaa
ccgttctacagaattcttttgaacgagtacgataaacttgagaaagaatacacaaacgaa
ggaagagcatacaatgtccatgcttcaaaacaagcatttcaagaaatagcgagggggtac
cttgaagaagctgagtggttacacaaaggttacgtgcctacatttcctgagtatatgaag
aacgggttaattacttcggcctacaacgtgatttcaaaatcagcattggtgggtatgggt
gcaattgcgaatgaaaacgctcttgcttggtatgaaacgcatccgaaaattctgaaagct
tccgagttaatttcaagactacaagacgatgtgatgaccttccagttcgagaggaaacga
ggacaatcagttacargcgtcgatgcttatataaaggaatacgatgtatctgaagaagtg
gccatkaaagagatcaagaagattatcgaaaatgcatggaaagatataaacraggggtgc
ctgaaacctrtggcggtctcaagggctctacwtactcctattctcaatcttgcacgaayg
atagatgtggtatacaagttcggcgattgtttcacctttccgggcaaaaccctcaaagac
tatattactctattgttcattactcctctcacaaactag
DBGET
integrated database retrieval system
