KEGG   Cynara cardunculus var. scolymus (artichoke): 112505426
Entry
112505426         CDS       T05604                                 
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2-like
  KO
K22379  E3 ubiquitin-protein ligase RNFT1 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112505426
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112505426
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112505426
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 zf-RING_6 zf-C3HC4_4 zf-RING_16 zf-ANAPC11 RING_XB3-XBAT31 zf-RING_10 zf-Nse Sina_RING
Other DBs
NCBI-GeneID: 112505426
NCBI-ProteinID: XP_024965106
LinkDB
Position
LG 2:17690701..17695914
AA seq 436 aa
MEPPSASILSSNSSRSGLRFRLREIIRAPLLAFLEHSGVLHTRSQSISSSDLEMQHENAI
EDGLVQYRDRGGVVNGAEEVSIRIMGAVEEELPPNVVVDGGGTVGNGEEQIDNFSGRRAE
ELRSGVGVNGVDGQIPSPSATNNRYDIQNVAQWIEQILPFSLLLLVVLIRQHLQGFFGTI
WISAVLFKSNDILQKQTALKGERKSFVLISITVIFMLHVVFIYWWYQNDDLMHPLVLLPP
KSVPPFWHALFIILVNDSMARQAGMVFKCLLLMYYKNTGGHNYRKQGQMLTLVEYMLLLY
RTLLPTPVWYRFFLNKEYGSIFSSVTAGLYLTFKLTSVIQKVRLVFAALRALSCKEVHYG
SSASTEQVSAAGDLCAICQEKMHSPIVLRCKHIFCEECVSEWFDRERTCPLCRAVVKPAD
IKSYSDGSTSLFFQFF
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggagcctccttctgcaagtattttatcttcaaatagcagtagaagtggtttaaggttc
aggttacgcgaaataattcgggcaccactgttggcttttttggagcattcgggcgttttg
cacacccggtcacaatcaatttccagttctgatctcgagatgcagcatgaaaatgcaatt
gaggatgggttggtccagtatcgcgaccgcggtggtgtagttaacggagcggaggaagtt
tctattaggattatgggtgccgtggaggaagagttgccgcctaatgtggtggtggatggt
ggtgggaccgttggtaatggtgaggaacaaatagataactttagtgggagaagagcagaa
gagttaaggagtggggttggtgttaatggagttgatggccagatcccttcaccttctgca
actaataatcgatatgatattcaaaatgtggcacaatggattgagcagattctccctttc
tctttgcttctcttggttgttttaatacgccaacatttacaagggttttttgggaccatt
tggatttctgcggtcctatttaaatcaaatgacattctgcaaaagcaaactgctttgaag
ggagagaggaaatcatttgttcttatcagcatcactgtgatctttatgctccatgtggtt
tttatttactggtggtatcaaaatgatgatcttatgcatccattggttttgcttcctcca
aagtcagtcccaccattctggcatgctttgttcatcatcttggttaatgattctatggca
cggcaagcgggaatggtcttcaagtgtctacttttaatgtactacaagaacactggaggt
cataattatcggaaacagggtcaaatgctaactctggttgagtacatgctactgctgtac
cgtactttgttgcctacccctgtttggtatcggttctttctgaacaaagaatatggaagt
atcttttcatcagttacagcaggattgtacttaactttcaagcttacatcggtcatacag
aaggttcgtttggtgtttgctgctttaagggcgttgtcttgcaaagaggtgcattatggg
tcatctgcatctactgagcaggtgagtgctgctggagatctttgtgccatttgtcaagaa
aaaatgcactctccgatcgtgctacggtgtaaacacatattttgcgaagaatgtgtatca
gaatggtttgatcgggagaggacatgcccgttatgtagagcagttgtgaagccagcagac
atcaaatcatatagcgatggatctacaagtctctttttccagttcttttga

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