Cynara cardunculus var. scolymus (artichoke): 112505426
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Entry
112505426 CDS
T05604
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2-like
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112505426
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112505426
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112505426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_10
zf-Nse
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112505426
NCBI-ProteinID:
XP_024965106
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All DBs
Position
LG 2:17690701..17695914
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AA seq
436 aa
AA seq
DB search
MEPPSASILSSNSSRSGLRFRLREIIRAPLLAFLEHSGVLHTRSQSISSSDLEMQHENAI
EDGLVQYRDRGGVVNGAEEVSIRIMGAVEEELPPNVVVDGGGTVGNGEEQIDNFSGRRAE
ELRSGVGVNGVDGQIPSPSATNNRYDIQNVAQWIEQILPFSLLLLVVLIRQHLQGFFGTI
WISAVLFKSNDILQKQTALKGERKSFVLISITVIFMLHVVFIYWWYQNDDLMHPLVLLPP
KSVPPFWHALFIILVNDSMARQAGMVFKCLLLMYYKNTGGHNYRKQGQMLTLVEYMLLLY
RTLLPTPVWYRFFLNKEYGSIFSSVTAGLYLTFKLTSVIQKVRLVFAALRALSCKEVHYG
SSASTEQVSAAGDLCAICQEKMHSPIVLRCKHIFCEECVSEWFDRERTCPLCRAVVKPAD
IKSYSDGSTSLFFQFF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccttctgcaagtattttatcttcaaatagcagtagaagtggtttaaggttc
aggttacgcgaaataattcgggcaccactgttggcttttttggagcattcgggcgttttg
cacacccggtcacaatcaatttccagttctgatctcgagatgcagcatgaaaatgcaatt
gaggatgggttggtccagtatcgcgaccgcggtggtgtagttaacggagcggaggaagtt
tctattaggattatgggtgccgtggaggaagagttgccgcctaatgtggtggtggatggt
ggtgggaccgttggtaatggtgaggaacaaatagataactttagtgggagaagagcagaa
gagttaaggagtggggttggtgttaatggagttgatggccagatcccttcaccttctgca
actaataatcgatatgatattcaaaatgtggcacaatggattgagcagattctccctttc
tctttgcttctcttggttgttttaatacgccaacatttacaagggttttttgggaccatt
tggatttctgcggtcctatttaaatcaaatgacattctgcaaaagcaaactgctttgaag
ggagagaggaaatcatttgttcttatcagcatcactgtgatctttatgctccatgtggtt
tttatttactggtggtatcaaaatgatgatcttatgcatccattggttttgcttcctcca
aagtcagtcccaccattctggcatgctttgttcatcatcttggttaatgattctatggca
cggcaagcgggaatggtcttcaagtgtctacttttaatgtactacaagaacactggaggt
cataattatcggaaacagggtcaaatgctaactctggttgagtacatgctactgctgtac
cgtactttgttgcctacccctgtttggtatcggttctttctgaacaaagaatatggaagt
atcttttcatcagttacagcaggattgtacttaactttcaagcttacatcggtcatacag
aaggttcgtttggtgtttgctgctttaagggcgttgtcttgcaaagaggtgcattatggg
tcatctgcatctactgagcaggtgagtgctgctggagatctttgtgccatttgtcaagaa
aaaatgcactctccgatcgtgctacggtgtaaacacatattttgcgaagaatgtgtatca
gaatggtttgatcgggagaggacatgcccgttatgtagagcagttgtgaagccagcagac
atcaaatcatatagcgatggatctacaagtctctttttccagttcttttga
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