Cynara cardunculus var. scolymus (artichoke): 112505443
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Entry
112505443 CDS
T05604
Name
(RefSeq) chloride channel protein CLC-f-like isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112505443
Transporters [BR:
ccav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
112505443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112505443
NCBI-ProteinID:
XP_024965121
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Position
LG 2:69709713..69721283
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AA seq
751 aa
AA seq
DB search
MSGGDRNDHAVPLRSSSSSSGDDLEGQVSSVRSSKGIKDLWNKLDRRFSGRRLSIKRRLP
KGNRSDFDYATASRSGGGGVVAGGDETLGDGAPPEWALLLIGCLLGLATGLCVAAFNRGV
HVIHEWSWAGTPNEGAAWLRLQRLGDTWHRILLIPVTGGVIVGVLHGLLEILHQIKQSNP
GHDFNLLSGVFPTVKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNKERRVAL
VAAGAAAGISSGFNAAVAGCFFAIETVLRPQCAENSPPFTTAMIILASVISSTVSSVILG
EKQAFTVPSYDLKSAAELPLYLILGMLCGVVSVLFTRLVAWFNSAFAYIEETFGLPAIVS
PALGGLGAGLIALKYPGILYWGFTNIDEILHTGKTASAPGIWLLAQLAAAKVVATALCKG
SGLVGGLYAPSLMIGAAVGAVFGGSAGKLINSAISGNAAIAQPQAYALVGMAATLASVCS
VPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQSKEAEGSDTRSSSRGYSFLSPI
DDKTDDWRQNGEDDLELCIMGPGDSHEAIDEDIILEDLKVSQAMTNSYPKVLLSSTVNEA
VKSMNDGQQSCVLVVDHEDHLEGILTYGDVKRGILRTPNGSSDSGSSTSDLSEYLVSSIC
TRGINYRGRKRGLLTCYPDTDLAIAKKLMEAKEIKQLPVVQHVVDFQEERKRRVVAILYY
HSIWSCLREELNRRGTWRTEDHIEEKSCNGQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggcgatcgcaatgatcacgctgtaccgttgcgatcgagttcttcgtcttca
ggagacgatttggaaggtcaagtgtcatctgtaagaagtagtaaaggcattaaggatctg
tggaacaagttggatcgacggttttctggtcgacgtcttagtatcaagcggcggttgcct
aagggaaaccggtcagatttcgattatgcgaccgctagccgtagtggaggcggtggcgtc
gttgctggtggtgatgagacccttggagatggtgctcctcccgaatgggcgctgctgctt
attggatgtcttcttggcttggctaccggtctctgtgtcgctgcctttaatcgtggggtg
catgtaatacatgaatggtcttgggctggtacccctaacgaaggtgctgcttggctacgt
ttacagaggctgggtgacacttggcaccgtatacttctaatacctgtcactggaggagtc
atcgttggggtgttgcatggtttacttgaaatattacaccagataaaacagtcaaatcct
ggacatgattttaacctgctttctggagtctttccaaccgtgaaggctatccaagctgct
gtaaccttaggtactggctgttctttgggtcctgaaggacctagtgtagatatagggaaa
tcatgtgccaatggattctcattaatgatggaaaataacaaggaacgcagggtagctctt
gttgcagctggtgcagctgctggcatatcttcaggtttcaatgcagcagtagctggttgt
ttctttgccattgagactgtgttaaggcctcaatgtgctgaaaactcccctcctttcaca
actgcaatgataatattggcatcagttatttcatcaactgtgtcaagtgttatacttgga
gaaaagcaggctttcacagtgccatcgtatgatttgaaatctgctgctgaactacctctc
tacttgatcttgggaatgctatgtggtgtggttagtgtgctatttactcgcttagtagcc
tggttcaacagcgcatttgcatatatcgaagaaacgtttggacttcctgctattgtttct
ccggcattaggtggtctaggagcagggttgatagctctaaaatatcctggaattctttac
tggggattcactaacattgacgaaattttgcataccgggaagacagcttcagcacccgga
atctggctattagcgcagttagctgccgcaaaagttgtagctacggctctttgcaaaggt
tcagggcttgttggtggtctgtatgcaccaagtttgatgataggtgctgcagttggtgcc
gtttttggaggttcagcagggaaattaattaattcagccatatcaggaaatgctgctatt
gctcagccacaggcatatgcattagttggaatggctgctaccttggcttctgtttgttct
gtgcccttgacttcagttctgcttctgtttgagctgacaaaggattatagaatattgctt
cctcttatgggagctgttggattggcaatatgggtgccatccgtagcgaaccaatctaag
gaggctgagggatctgatacaaggagttcatcaagaggttattcctttctttcaccaatt
gatgacaaaactgacgattggagacaaaatggcgaagatgatttggaactttgcataatg
ggacctggtgatagccatgaagcaattgatgaggatattattctcgaggatttgaaggtt
tctcaggctatgacaaacagctatccgaaagtcctattatcatcaactgttaacgaggct
gtaaaaagcatgaacgatggccaacaaagttgtgtgcttgttgttgatcatgaagatcac
ttagaagggattctgacctatggtgacgttaaaaggggcatccttaggacccctaatgga
tcctccgacagtggttcatcaacttcagatttaagtgagtatttggtttcttccatctgc
actcgagggataaactatcgtggaagaaagcgtggacttctaacttgttatcccgataca
gatttggcaattgctaaaaaactaatggaggccaaagaaattaagcaattgcctgtggta
cagcatgttgtcgatttccaagaagaaagaaagcgaagggttgttgccattctctattac
cattcgatctggagctgtctcagagaggagctaaatcgccggggaacatggaggaccgaa
gaccatattgaagagaagagttgcaatgggcagtga
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