KEGG   Cynara cardunculus var. scolymus (artichoke): 112505518
Entry
112505518         CDS       T05604                                 
Name
(RefSeq) WD repeat-containing protein 13-like isoform X1
  KO
K24739  WD repeat-containing protein 13
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ccav04990]
    112505518
Domain-containing proteins not elsewhere classified [BR:ccav04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   112505518
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_EML KNTC1_N Beta-prop_ACSF4 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_VPS8 CPSF_A Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 112505518
NCBI-ProteinID: XP_024965185
LinkDB
Position
LG 2:65068900..65076664
AA seq 487 aa
MADQTIEKCSSEVGDDEKKQRIKKNVTEDPETFSCMLQPCPANSDPNYVGIRRLLLFGKA
ESGVLRRKDWRCNGKGYVAYRNFINRPDNWINSQIPSRGSTPGASGRWIHSPSQLSLALE
MESLNGSKDLRESQTLSRTVSFGANSSDFEYPRRKAEPAYSFVGMHCIFDECKAMVTVIK
FGHMSSDILAYGATDGTLTVCTVSEPPSVMKKLTGHSKDVTDFDFTLNNQYIASSSLDKT
VRVWDIPKGLCIRVIYGVASQLCIRFHPVNNNFLSVGNANREASVFNFSTGRLISKIVVD
SEITALDYDHTGQFIFCGDTQGSIYTVKVNSHQGTLSRSHRTRTSSKHKSEFTTIQYRSF
SLLTQGPVLLSLTRDGSLSFFSVSLEMQGYLTLRCSLQLAPRLHSIRASFCPLLSLEKGE
YIVIGSEDATVYFYDLTRLKNTCVNKLQGHGYPVIAVAWNHGENLLASSDFGGTVIVWKR
EKTKQKM
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcggatcagacgatcgagaaatgttcgtctgaagttggtgatgatgagaaaaagcag
agaataaaaaagaatgttactgaggatccagaaaccttcagctgtatgcttcagccctgt
cccgccaactccgatcctaattacgtcggtattcgtcgtcttcttctgtttggcaaggct
gaatcaggtgttcttcggcggaaggactggagatgcaatggaaaaggctatgtggcttat
cgtaatttcatcaacaggccagataattggataaattcgcaaataccgagtcgcggtagc
acccctggagccagtgggcgatggatacattctccaagtcaactctcccttgcgcttgag
atggaaagcttgaatggtagcaaggacctgcgagagagccaaacactgagtcgtactgtt
agttttggtgcaaattcaagtgattttgaatacccacgtcgaaaagctgaacctgcatat
tcttttgtaggaatgcattgcatctttgatgagtgcaaagccatggttactgttataaag
tttgggcatatgagttctgatatacttgcctatggagcaacagatggaacattaacagtt
tgcaccgtctcagaaccaccttccgtcatgaagaaattgactgggcactcaaaagatgtt
acagattttgacttcacgttaaacaaccagtacattgcatcatcttcattggataaaact
gtgagggtatgggatatcccaaagggcctttgcattcgagtaatatatggggttgcttcc
cagctttgtattcgatttcatcctgtgaataataactttctttcagtcggcaacgcaaac
agagaagcctcggtattcaattttagtacgggaagattaataagtaagatagtggttgac
agtgagattaccgcccttgattatgaccatactggccagtttattttctgtggagataca
cagggttctatatacacagttaaagtaaactctcatcaaggtaccttgtctcggtctcat
cgtactagaactagcagcaagcataaatctgaattcacaaccatccagtatagatcattt
tctctgctgacacaaggtcctgtgttgctttctcttactcgagatggaagtttgtctttc
ttcagtgtttcgttggagatgcaaggttatctgactcttcgctgctccctccagttggct
ccacgacttcacagtatccgtgcttctttttgtcctttgctttcccttgaaaaaggagaa
tatatagtcattggaagcgaggatgcaacagtctatttttatgacttaactcgtctgaag
aacacatgcgtgaacaagctacaggggcatggatacccagtcattgcagttgcatggaat
catggtgagaacttgttggcatcctctgattttggtggcactgtaattgtgtggaagaga
gaaaaaacaaagcagaagatgtga

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