Cynara cardunculus var. scolymus (artichoke): 112505557
Help
Entry
112505557 CDS
T05604
Name
(RefSeq) protein STICHEL-like
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaA_N-like_STI
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_18
Herpes_Helicase
AAA_22
RCF1-5-like_lid
RuvB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
112505557
NCBI-ProteinID:
XP_024965221
LinkDB
All DBs
Position
LG 2:30281459..30289643
Genome browser
AA seq
1238 aa
AA seq
DB search
MSGTRSGSYSGGLVDPSNLHLKKELTQIRKAARALRDPGTTSSWRSPLSSSRSTTAVPAA
AASSFITTAPSNHYNHHYRNSGGYSVEEPTENNTKDDANNNNVNGSSNNDNSNRRKEKKV
FLYNWRTQRSESERSASVTGQTDDNRRMSRHQQRGNADDGIGDGEESVDDSLSDARNDGD
TKSDTYCAAATSSSSKMFNTCKDSNNLATPPVRRASLMKKKPKKMTHSSAALKHQLQRRL
SLVDQYDDVNSEDIVVKGSSVTSPLLSRLKSSKLLGGSGSRKDDSSYCYSTPALSTSSFN
KYWVRNPSTVGSWDATTGSLNDGDEGVDYHDNDDDQLDLPGRQGCGIPCYWSSSKRSTPK
RGGVCGSCYSPSFSDTLRRKGSSILCGSQTMYHRHRGSSVGACNKKRLVHTTSQGLVPLL
TNGAESRDRSSVGTDDELSTNYGELDLEALSRLDGRRWSTSYRSQEGLELVAVNGEREGD
SPSSLDNINCFSHKYKPMFFEDLVGQNVVVQSLVNAIMRGRIAPIYLFQGTRGTGKTSTA
RIFAAALNCLATGETRPCGICRECADYITGKSQVITEMDGSNKKGIDKIRYLMKKLQMGP
SISTFIQHNVYVIDECHLLPSKLWLAFQKFLEEPPPSVVFIFITTDLDNVPRAVLSRCQK
YLFSKIKDSDIVIRLRKIAEEENLDVESGAFDLIALNVEGSLRDAETMLDQLSLLGKRIT
TNLVNELVGVVSDEKLLELLELAMSSNTAETVKRAREFMDLGVDPMVLMSQMATLIMDII
AGTYQVVEAGYGDSLFDGRSLTEAELERLKHALKLLSEAEKQLRLSSERSTWFTATLLQL
GSAPSADPTPSGSSRRQSSRTTDDDPSATFKDIYFQKQRSDSHYSPQKSASKPIYRNSTS
PEEVLLPKRQLINGDGPSASNGDVVVGNTIPRHSNSSILDDIWVRCIDKCHSKTLRQLLH
TYGNLVSISEDKGTLVAYIVFQNSDIKSRAERFLSSITNSFEIVLCRNIEVRIIFLSDDG
TAPNSVLAQKQIDSLQEPIKASGGSFHDAGSKSSGVLAEGDGGTKGRKSGNPVQRIESII
HEQRLETAWLQTAEKGTPGSLNRLKPERNQVLPQDGSDHHQRQMVSNDPSSQQQWEDELT
RELNLLKINDGKTLSREHKYPISPSLLHDSNLVGKYNKESMGYESGSGGGGCLCWNKSKH
NRRGKIKPGTPVGPRRSARFLLFGECGKSGRTDQRSRR
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggacgcgcagcggtagttatagtggtggtctagttgatcccagcaatctgcat
ctgaagaaggagttaactcaaattaggaaagctgctcgtgcgttacgagatcctggtacg
acttcctcatggcggtctccgcttagttcatctagatccaccaccgccgttcctgcagca
gctgcttcatctttcatcaccactgcacccagcaaccattataatcaccattatagaaac
agcggtggttacagtgtagaagaacccactgagaataatacaaaggacgacgccaacaac
aacaatgttaatggtagcagtaataatgataatagtaataggagaaaagagaagaaagtg
tttttgtataattggagaacgcagagatcggagagtgagaggagcgcttccgtcacgggg
caaacagatgataataggagaatgtcaaggcatcaacaaagaggcaatgccgatgatggt
attggtgatggagaggagagtgttgatgatagcttgagcgatgcgcgaaatgacggggat
acgaagagcgatacctactgtgctgctgcgacgtcatcatcttcaaagatgtttaatact
tgcaaagattcaaataatctagcaactcccccagttaggagggcatcgttgatgaagaag
aagccaaagaaaatgacacattcatctgctgctttaaaacatcaacttcagagacgacta
agtttagttgaccagtatgatgatgtcaattctgaggatatagttgttaaagggtcttca
gtgacatcccctctgctgtctaggctcaagtcgtcgaaattgttgggaggtagtggtagt
aggaaagatgattcatcttactgttatagcaccccagctttgtccacaagttcatttaat
aagtattgggttaggaatccaagcacagttggctcatgggatgcgacaacagggtctttg
aatgatggggatgaaggagtggattaccatgataatgacgacgaccagttggatttaccg
ggtcgccagggatgtgggattccttgttactggtcttcctccaagaggagtaccccgaaa
cgtggtggagtttgtggtagttgttattcaccctcattttcggatacattaaggagaaaa
ggaagcagcatcttgtgtgggagccaaaccatgtatcatagacaccgtggatcatctgtg
ggtgcttgcaacaagaagaggcttgtccacacaacttcccagggtcttgttccactgtta
acaaatggtgctgaaagcagagaccgctcgtctgttgggacagatgatgagctttcaact
aactatggggagcttgatttagaagctttgagtcgattggatggaaggaggtggtcaaca
agctacaggagtcaagaaggattggagctagtagctgtaaatggggaaagagaaggggat
tcgccttcatctcttgataatattaattgcttcagccacaagtataagccaatgttcttt
gaggatttggttggccagaatgttgtggtccagtcccttgttaatgccatcatgagggga
aggattgctcccatctatctgtttcaaggtacccgtggtactgggaaaacatctactgct
aggatttttgctgctgccttgaattgccttgccaccggagaaacgagaccttgtggaatt
tgcagggaatgtgctgactatattacaggcaagagccaggtcattactgaaatggatggc
tccaataagaaggggattgataaaattagatatctgatgaagaaactgcagatgggtcct
tctatatcaacctttatacagcacaatgtttatgttattgacgagtgtcacctgttacca
tctaagttgtggttggctttccaaaagtttcttgaagaaccacctccgagtgtcgttttc
atctttataactaccgatcttgacaatgtgccccgtgctgtgctgtctcgctgccaaaag
tatctgttcagcaaaattaaggatagtgacatagttatcaggttgaggaaaatcgcagag
gaggagaatctggatgttgaatcaggcgcatttgatttgattgctctgaatgtagagggt
tcacttcgagatgcagaaaccatgttggatcagttaagtttgttaggaaaaagaatcacc
actaatctagtgaatgaacttgtaggagtggtctctgatgagaagttattggaacttttg
gagttggcaatgtcatcaaacacagcggaaacagtgaaaagagcaagagaatttatggat
ttgggggttgaccctatggttttgatgtctcaaatggccacgcttattatggatatcatt
gctggaacatatcaagttgttgaagctggatatggtgactcgttatttgatggtagaagc
ttgacagaagctgaactggagagattaaagcatgctttgaaacttctttctgaggctgag
aaacagttgagactttccagtgaaagatcaacatggttcacagccacccttttacagctt
ggctctgccccatcggcagatcctactccttcaggaagcagtagaagacagagttcgaga
acgactgatgatgatccatctgctactttcaaagatatatatttccagaaacagaggtct
gattctcactattcaccccaaaagtctgcttctaagcctatttacagaaattcaaccagc
ccagaagaagtgctcttaccaaagaggcaattgataaatggggacggaccatctgcctca
aatggtgatgttgtagttggaaatactattccaagacacagtaactcaagtatattggat
gatatctgggtccgttgcattgataagtgccattctaaaacactgaggcagctgttacat
acttacggaaatcttgtatctatttctgaagataaaggcacgcttgttgcttatatcgtc
tttcagaatagtgatatcaagagcagagctgaaaggttccttagcagcatcacaaactca
tttgagattgttctctgtcgcaatatagaggttagaattatattcctgtcagatgatggg
actgcaccaaatagtgttttggctcagaagcagattgattcacttcaagaaccaataaag
gcatcaggaggaagctttcatgatgctggaagcaagtctagtggtgtgttggcagaaggg
gatggtggtacaaaagggagaaagagcgggaatccggttcaaagaatagaatcaatcata
catgaacagaggttagaaactgcatggttacaaactgcagaaaaaggcacccctggatca
ttgaatcgtttgaaacccgagaggaatcaagtcttgcctcaagatggaagtgatcatcat
cagcgtcaaatggtatcaaatgatccctcatcacagcagcaatgggaagatgaattgacc
cgtgaactcaaccttttgaagatcaatgacgggaagaccctttcgagggaacataagtat
ccgatatcaccaagcttgttgcatgatagcaatttagttggcaagtacaacaaagaaagc
atgggatacgagtctggctcaggaggcggtggttgtttatgttggaacaaaagcaagcat
aaccggagggggaagatcaagcctggaaccccggttggaccacgtagaagtgcaagattt
ttattgttcggggagtgtggaaaatcaggaaggacagatcagagatctagaaggtga
DBGET
integrated database retrieval system
